Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS29Q9UBQ0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 KLF2P3-201ENST00000451977 1087 ntBASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 AC125807.1-201ENST00000483097 614 ntBASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 AC015911.4-201ENST00000588022 1070 ntBASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 AL691403.2-201ENST00000618460 490 ntBASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 AC073592.8-201ENST00000624126 511 ntBASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.96□□□□□ -0.01
VPS29Q9UBQ0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
VPS29Q9UBQ0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.96□□□□□ -0.02
VPS29Q9UBQ0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VPS29Q9UBQ0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.96□□□□□ -0.02
VPS29Q9UBQ0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.96□□□□□ -0.02
VPS29Q9UBQ0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VPS29Q9UBQ0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 AL161772.1-201ENST00000610494 4412 ntBASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 AL133267.1-201ENST00000398220 340 ntBASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 RN7SL618P-201ENST00000477850 296 ntBASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 AC069120.2-201ENST00000524091 540 ntBASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 AL512361.1-201ENST00000554200 418 ntBASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 AC015910.1-201ENST00000579400 975 ntBASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 CICP11-201ENST00000434745 2827 ntBASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms