Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NLKQ9UBE8 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NLKQ9UBE8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NLKQ9UBE8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
NLKQ9UBE8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NLKQ9UBE8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.94□□□□□ -0.18
NLKQ9UBE8 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NLKQ9UBE8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NLKQ9UBE8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NLKQ9UBE8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NLKQ9UBE8 POLD2P1-201ENST00000511220 997 ntBASIC13.94□□□□□ -0.18
NLKQ9UBE8 AC008677.1-201ENST00000519230 1561 ntBASIC13.94□□□□□ -0.18
NLKQ9UBE8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.94□□□□□ -0.18
NLKQ9UBE8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.94□□□□□ -0.18
NLKQ9UBE8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.94□□□□□ -0.18
NLKQ9UBE8 AC040169.1-201ENST00000565382 521 ntBASIC13.94□□□□□ -0.18
NLKQ9UBE8 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.94□□□□□ -0.18
NLKQ9UBE8 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NLKQ9UBE8 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.94□□□□□ -0.18
NLKQ9UBE8 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
NLKQ9UBE8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NLKQ9UBE8 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NLKQ9UBE8 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NLKQ9UBE8 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NLKQ9UBE8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.94□□□□□ -0.18
NLKQ9UBE8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.94□□□□□ -0.18
NLKQ9UBE8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
NLKQ9UBE8 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NLKQ9UBE8 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NLKQ9UBE8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.94□□□□□ -0.18
NLKQ9UBE8 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NLKQ9UBE8 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
NLKQ9UBE8 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NLKQ9UBE8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NLKQ9UBE8 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
NLKQ9UBE8 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NLKQ9UBE8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.93□□□□□ -0.18
NLKQ9UBE8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.93□□□□□ -0.18
NLKQ9UBE8 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NLKQ9UBE8 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
NLKQ9UBE8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NLKQ9UBE8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.93□□□□□ -0.18
NLKQ9UBE8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NLKQ9UBE8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NLKQ9UBE8 CICP20-201ENST00000443330 2801 ntBASIC13.93□□□□□ -0.18
NLKQ9UBE8 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.93□□□□□ -0.18
NLKQ9UBE8 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NLKQ9UBE8 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NLKQ9UBE8 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
NLKQ9UBE8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NLKQ9UBE8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.93□□□□□ -0.18
NLKQ9UBE8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NLKQ9UBE8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NLKQ9UBE8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NLKQ9UBE8 AC092865.6-201ENST00000642101 219 ntBASIC13.93□□□□□ -0.18
NLKQ9UBE8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NLKQ9UBE8 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NLKQ9UBE8 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NLKQ9UBE8 AL592424.1-201ENST00000563624 1536 ntBASIC13.93□□□□□ -0.18
NLKQ9UBE8 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NLKQ9UBE8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.93□□□□□ -0.18
NLKQ9UBE8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.93□□□□□ -0.18
NLKQ9UBE8 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NLKQ9UBE8 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
NLKQ9UBE8 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NLKQ9UBE8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NLKQ9UBE8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NLKQ9UBE8 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NLKQ9UBE8 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NLKQ9UBE8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NLKQ9UBE8 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NLKQ9UBE8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.92□□□□□ -0.18
NLKQ9UBE8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NLKQ9UBE8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NLKQ9UBE8 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NLKQ9UBE8 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NLKQ9UBE8 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NLKQ9UBE8 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NLKQ9UBE8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.92□□□□□ -0.18
NLKQ9UBE8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NLKQ9UBE8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.92□□□□□ -0.18
NLKQ9UBE8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NLKQ9UBE8 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NLKQ9UBE8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NLKQ9UBE8 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.92□□□□□ -0.18
NLKQ9UBE8 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NLKQ9UBE8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NLKQ9UBE8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
NLKQ9UBE8 AC092127.1-201ENST00000567093 3455 ntBASIC13.92□□□□□ -0.18
NLKQ9UBE8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NLKQ9UBE8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NLKQ9UBE8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NLKQ9UBE8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.92□□□□□ -0.18
NLKQ9UBE8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.92□□□□□ -0.18
NLKQ9UBE8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.92□□□□□ -0.18
NLKQ9UBE8 AC023274.1-201ENST00000418278 595 ntBASIC13.92□□□□□ -0.18
NLKQ9UBE8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.92□□□□□ -0.18
NLKQ9UBE8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.92□□□□□ -0.18
NLKQ9UBE8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NLKQ9UBE8 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms