Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 MRPS18AP1-201ENST00000414458 589 ntBASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 AC126365.1-201ENST00000578585 1514 ntBASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 AC138035.3-201ENST00000622706 2791 ntBASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
UBQLN4Q9NRR5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
UBQLN4Q9NRR5 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
UBQLN4Q9NRR5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBQLN4Q9NRR5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBQLN4Q9NRR5 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBQLN4Q9NRR5 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBQLN4Q9NRR5 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBQLN4Q9NRR5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.33□□□□□ -0.11
UBQLN4Q9NRR5 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
UBQLN4Q9NRR5 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBQLN4Q9NRR5 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms