Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
CDC42SE2Q9NRR3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC10.77□□□□□ -0.68
CDC42SE2Q9NRR3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
CDC42SE2Q9NRR3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC10.77□□□□□ -0.68
CDC42SE2Q9NRR3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CDC42SE2Q9NRR3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
CDC42SE2Q9NRR3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 SPCS2P4-201ENST00000436160 681 ntBASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 LINC01225-203ENST00000563550 1244 ntBASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 AC026120.1-201ENST00000611536 926 ntBASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
CDC42SE2Q9NRR3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 AC067750.1-201ENST00000608826 6545 ntBASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 AZGP1P1-201ENST00000411909 902 ntBASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 KRT18P3-201ENST00000451602 1288 ntBASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 KRT126P-201ENST00000549467 1181 ntBASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC10.76□□□□□ -0.69
CDC42SE2Q9NRR3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms