Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.37□□□□□ -0.11
SDHAF3Q9NRP4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SDHAF3Q9NRP4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.37□□□□□ -0.11
SDHAF3Q9NRP4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SDHAF3Q9NRP4 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SDHAF3Q9NRP4 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 AL133267.1-201ENST00000398220 340 ntBASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 AC074338.1-201ENST00000416825 156 ntBASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 AC093004.1-201ENST00000508850 424 ntBASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 TPRX2P-201ENST00000535362 881 ntBASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 AC104794.3-201ENST00000566840 1248 ntBASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 LINC02560-201ENST00000596379 459 ntBASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SDHAF3Q9NRP4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 AL391825.1-201ENST00000457671 1364 ntBASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 SPDYE19P-201ENST00000338590 713 ntBASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 UGT1A2P-201ENST00000454886 866 ntBASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 KRT18P43-201ENST00000469825 1281 ntBASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 TERF1P3-201ENST00000505638 1227 ntBASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 AC008761.3-201ENST00000624803 892 ntBASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 AC104581.4-201ENST00000623126 3052 ntBASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms