Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 FAM8A3P-201ENST00000427218 844 ntBASIC13.69□□□□□ -0.22
CDH20Q9HBT6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 AC008738.7-201ENST00000609744 511 ntBASIC13.69□□□□□ -0.22
CDH20Q9HBT6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 AC114501.2-201ENST00000439631 535 ntBASIC13.68□□□□□ -0.22
CDH20Q9HBT6 BCRP1-201ENST00000444246 691 ntBASIC13.68□□□□□ -0.22
CDH20Q9HBT6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 SPCS2P1-201ENST00000561636 679 ntBASIC13.68□□□□□ -0.22
CDH20Q9HBT6 AC009407.1-201ENST00000568958 598 ntBASIC13.68□□□□□ -0.22
CDH20Q9HBT6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 AL096865.1-201ENST00000606796 927 ntBASIC13.68□□□□□ -0.22
CDH20Q9HBT6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 AC004461.2-201ENST00000629517 803 ntBASIC13.68□□□□□ -0.22
CDH20Q9HBT6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.68□□□□□ -0.22
CDH20Q9HBT6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms