Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 MIR3147-201ENST00000577811 66 ntBASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 RN7SL555P-201ENST00000584742 339 ntBASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 AC018635.2-201ENST00000608625 364 ntBASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 LINC01144-201ENST00000626198 1710 ntBASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.14■□□□□ 0.34
UBE2OQ9C0C9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.14■□□□□ 0.34
UBE2OQ9C0C9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.14■□□□□ 0.34
UBE2OQ9C0C9 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
UBE2OQ9C0C9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 AL691432.1-201ENST00000596308 1422 ntBASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 EEF1DP4-201ENST00000446006 880 ntBASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 SLED1-202ENST00000512051 380 ntBASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 AC093813.1-201ENST00000605066 256 ntBASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 AC007663.3-201ENST00000609632 465 ntBASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 AC091544.8-201ENST00000619490 361 ntBASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 PCDHA14-201ENST00000506751 2298 ntBASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2OQ9C0C9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2OQ9C0C9 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms