Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 LINC02447-202ENST00000501888 2146 ntBASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 AL512361.1-201ENST00000554200 418 ntBASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 AC243562.2-201ENST00000561247 970 ntBASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 AC009407.1-201ENST00000568958 598 ntBASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 AC008738.7-201ENST00000609744 511 ntBASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 AC022532.1-201ENST00000624563 1728 ntBASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 AC013268.4-201ENST00000637413 2228 ntBASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 AC044860.1-202ENST00000559481 777 ntBASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 AC010336.2-201ENST00000564226 506 ntBASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
PCGF1Q9BSM1 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms