Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.87□□□□□ -0.19
VRK1Q99986 AC026748.1-201ENST00000624349 3251 ntBASIC13.87□□□□□ -0.19
VRK1Q99986 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.87□□□□□ -0.19
VRK1Q99986 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.87□□□□□ -0.19
VRK1Q99986 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.87□□□□□ -0.19
VRK1Q99986 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.87□□□□□ -0.19
VRK1Q99986 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
VRK1Q99986 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.87□□□□□ -0.19
VRK1Q99986 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.87□□□□□ -0.19
VRK1Q99986 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.87□□□□□ -0.19
VRK1Q99986 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
VRK1Q99986 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.87□□□□□ -0.19
VRK1Q99986 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.87□□□□□ -0.19
VRK1Q99986 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VRK1Q99986 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.87□□□□□ -0.19
VRK1Q99986 GGT3P-204ENST00000453783 1664 ntBASIC13.87□□□□□ -0.19
VRK1Q99986 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VRK1Q99986 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.87□□□□□ -0.19
VRK1Q99986 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
VRK1Q99986 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.87□□□□□ -0.19
VRK1Q99986 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.87□□□□□ -0.19
VRK1Q99986 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK1Q99986 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.86□□□□□ -0.19
VRK1Q99986 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK1Q99986 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK1Q99986 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.86□□□□□ -0.19
VRK1Q99986 AC023908.3-201ENST00000564211 3047 ntBASIC13.86□□□□□ -0.19
VRK1Q99986 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK1Q99986 AL589702.1-201ENST00000641229 1509 ntBASIC13.86□□□□□ -0.19
VRK1Q99986 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.86□□□□□ -0.19
VRK1Q99986 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VRK1Q99986 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.86□□□□□ -0.19
VRK1Q99986 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK1Q99986 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK1Q99986 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK1Q99986 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK1Q99986 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK1Q99986 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.86□□□□□ -0.19
VRK1Q99986 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.86□□□□□ -0.19
VRK1Q99986 HLA-V-204ENST00000476601 1289 ntBASIC13.86□□□□□ -0.19
VRK1Q99986 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.86□□□□□ -0.19
VRK1Q99986 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.86□□□□□ -0.19
VRK1Q99986 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.86□□□□□ -0.19
VRK1Q99986 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.86□□□□□ -0.19
VRK1Q99986 AC008761.3-201ENST00000624803 892 ntBASIC13.86□□□□□ -0.19
VRK1Q99986 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK1Q99986 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK1Q99986 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
VRK1Q99986 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK1Q99986 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK1Q99986 AC005622.1-201ENST00000636801 1703 ntBASIC13.86□□□□□ -0.19
VRK1Q99986 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK1Q99986 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
VRK1Q99986 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.86□□□□□ -0.19
VRK1Q99986 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
VRK1Q99986 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VRK1Q99986 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.86□□□□□ -0.19
VRK1Q99986 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
VRK1Q99986 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VRK1Q99986 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VRK1Q99986 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK1Q99986 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VRK1Q99986 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.86□□□□□ -0.19
VRK1Q99986 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
VRK1Q99986 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
VRK1Q99986 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.85□□□□□ -0.19
VRK1Q99986 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
VRK1Q99986 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.85□□□□□ -0.19
VRK1Q99986 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.85□□□□□ -0.19
VRK1Q99986 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.85□□□□□ -0.19
VRK1Q99986 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.85□□□□□ -0.19
VRK1Q99986 FAM207CP-201ENST00000443486 507 ntBASIC13.85□□□□□ -0.19
VRK1Q99986 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms