Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CDCA3Q99618 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CDCA3Q99618 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CDCA3Q99618 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CDCA3Q99618 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
CDCA3Q99618 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.97■□□□□ 0.15
CDCA3Q99618 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.97■□□□□ 0.15
CDCA3Q99618 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CDCA3Q99618 AC104073.2-201ENST00000453737 312 ntBASIC15.97■□□□□ 0.15
CDCA3Q99618 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.97■□□□□ 0.15
CDCA3Q99618 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.97■□□□□ 0.15
CDCA3Q99618 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.97■□□□□ 0.15
CDCA3Q99618 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 AC100827.2-201ENST00000563214 1194 ntBASIC15.97■□□□□ 0.15
CDCA3Q99618 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.97■□□□□ 0.15
CDCA3Q99618 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.97■□□□□ 0.15
CDCA3Q99618 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.97■□□□□ 0.15
CDCA3Q99618 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CDCA3Q99618 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.97■□□□□ 0.15
CDCA3Q99618 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CDCA3Q99618 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
CDCA3Q99618 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.97■□□□□ 0.15
CDCA3Q99618 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CDCA3Q99618 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
CDCA3Q99618 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDCA3Q99618 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CDCA3Q99618 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CDCA3Q99618 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDCA3Q99618 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDCA3Q99618 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDCA3Q99618 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.96■□□□□ 0.15
CDCA3Q99618 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDCA3Q99618 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDCA3Q99618 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.96■□□□□ 0.15
CDCA3Q99618 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CDCA3Q99618 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDCA3Q99618 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CDCA3Q99618 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CDCA3Q99618 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDCA3Q99618 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.96■□□□□ 0.15
CDCA3Q99618 RPL5P21-201ENST00000404620 815 ntBASIC15.96■□□□□ 0.15
CDCA3Q99618 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.96■□□□□ 0.15
CDCA3Q99618 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.96■□□□□ 0.15
CDCA3Q99618 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.96■□□□□ 0.15
CDCA3Q99618 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.96■□□□□ 0.15
CDCA3Q99618 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDCA3Q99618 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.96■□□□□ 0.15
CDCA3Q99618 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDCA3Q99618 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDCA3Q99618 AC090164.2-201ENST00000611487 516 ntBASIC15.96■□□□□ 0.15
CDCA3Q99618 AP000346.4-201ENST00000614827 381 ntBASIC15.96■□□□□ 0.15
CDCA3Q99618 AL136301.1-201ENST00000615830 422 ntBASIC15.96■□□□□ 0.15
CDCA3Q99618 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.96■□□□□ 0.15
CDCA3Q99618 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.96■□□□□ 0.15
CDCA3Q99618 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDCA3Q99618 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDCA3Q99618 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CDCA3Q99618 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CDCA3Q99618 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CDCA3Q99618 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.14
CDCA3Q99618 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDCA3Q99618 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDCA3Q99618 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.96■□□□□ 0.14
CDCA3Q99618 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.96■□□□□ 0.14
CDCA3Q99618 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CDCA3Q99618 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
CDCA3Q99618 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDCA3Q99618 FKBP4P6-201ENST00000457486 1332 ntBASIC15.95■□□□□ 0.14
CDCA3Q99618 FLJ38576-201ENST00000623820 2459 ntBASIC15.95■□□□□ 0.14
CDCA3Q99618 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDCA3Q99618 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDCA3Q99618 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CDCA3Q99618 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDCA3Q99618 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDCA3Q99618 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CDCA3Q99618 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CDCA3Q99618 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.95■□□□□ 0.14
CDCA3Q99618 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDCA3Q99618 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.95■□□□□ 0.14
CDCA3Q99618 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms