Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.08□□□□□ -0.32
CCL13Q99616 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.08□□□□□ -0.32
CCL13Q99616 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.08□□□□□ -0.32
CCL13Q99616 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL13Q99616 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL13Q99616 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL13Q99616 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL13Q99616 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL13Q99616 AC136621.1-201ENST00000624017 2304 ntBASIC13.08□□□□□ -0.32
CCL13Q99616 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL13Q99616 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
CCL13Q99616 AC007541.1-201ENST00000570282 1469 ntBASIC13.08□□□□□ -0.32
CCL13Q99616 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL13Q99616 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL13Q99616 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.08□□□□□ -0.32
CCL13Q99616 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL13Q99616 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL13Q99616 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.08□□□□□ -0.32
CCL13Q99616 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL13Q99616 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL13Q99616 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.08□□□□□ -0.32
CCL13Q99616 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL13Q99616 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL13Q99616 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CCL13Q99616 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL13Q99616 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL13Q99616 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL13Q99616 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL13Q99616 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CCL13Q99616 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL13Q99616 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL13Q99616 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL13Q99616 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL13Q99616 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL13Q99616 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CCL13Q99616 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL13Q99616 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CCL13Q99616 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL13Q99616 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL13Q99616 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL13Q99616 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.07□□□□□ -0.32
CCL13Q99616 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL13Q99616 TERF1P3-201ENST00000505638 1227 ntBASIC13.07□□□□□ -0.32
CCL13Q99616 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.07□□□□□ -0.32
CCL13Q99616 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL13Q99616 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.07□□□□□ -0.32
CCL13Q99616 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL13Q99616 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.07□□□□□ -0.32
CCL13Q99616 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL13Q99616 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL13Q99616 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.07□□□□□ -0.32
CCL13Q99616 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL13Q99616 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL13Q99616 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL13Q99616 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL13Q99616 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL13Q99616 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL13Q99616 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL13Q99616 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL13Q99616 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CCL13Q99616 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL13Q99616 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CCL13Q99616 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL13Q99616 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL13Q99616 AL121723.1-201ENST00000445194 1519 ntBASIC13.07□□□□□ -0.32
CCL13Q99616 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CCL13Q99616 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
CCL13Q99616 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL13Q99616 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL13Q99616 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CCL13Q99616 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.06□□□□□ -0.32
CCL13Q99616 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.06□□□□□ -0.32
CCL13Q99616 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.06□□□□□ -0.32
CCL13Q99616 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.06□□□□□ -0.32
CCL13Q99616 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL13Q99616 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.06□□□□□ -0.32
CCL13Q99616 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL13Q99616 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.06□□□□□ -0.32
CCL13Q99616 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.06□□□□□ -0.32
CCL13Q99616 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL13Q99616 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCL13Q99616 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL13Q99616 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.06□□□□□ -0.32
CCL13Q99616 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL13Q99616 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CCL13Q99616 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL13Q99616 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.06□□□□□ -0.32
CCL13Q99616 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CCL13Q99616 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL13Q99616 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL13Q99616 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL13Q99616 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL13Q99616 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CCL13Q99616 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL13Q99616 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL13Q99616 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.06□□□□□ -0.32
CCL13Q99616 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.06□□□□□ -0.32
CCL13Q99616 KRT18P43-201ENST00000469825 1281 ntBASIC13.06□□□□□ -0.32
CCL13Q99616 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.06□□□□□ -0.32
CCL13Q99616 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms