Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 AC105917.1-201ENST00000506637 2539 ntBASIC12.71□□□□□ -0.37
ZNF48Q96MX3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 PDIA3P1-201ENST00000471856 1510 ntBASIC12.71□□□□□ -0.38
ZNF48Q96MX3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.71□□□□□ -0.38
ZNF48Q96MX3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF48Q96MX3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF48Q96MX3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
ZNF48Q96MX3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.71□□□□□ -0.38
ZNF48Q96MX3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF48Q96MX3 AP001282.1-201ENST00000531301 1499 ntBASIC12.71□□□□□ -0.38
ZNF48Q96MX3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF48Q96MX3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF48Q96MX3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
ZNF48Q96MX3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.71□□□□□ -0.38
ZNF48Q96MX3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF48Q96MX3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF48Q96MX3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 CTBP2P5-201ENST00000454986 1264 ntBASIC12.7□□□□□ -0.38
ZNF48Q96MX3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.7□□□□□ -0.38
ZNF48Q96MX3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 INTS4P2-202ENST00000614726 2019 ntBASIC12.7□□□□□ -0.38
ZNF48Q96MX3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF48Q96MX3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 AC093525.8-201ENST00000624099 1342 ntBASIC12.69□□□□□ -0.38
ZNF48Q96MX3 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.69□□□□□ -0.38
ZNF48Q96MX3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 TSPY26P-202ENST00000565928 3884 ntBASIC12.69□□□□□ -0.38
ZNF48Q96MX3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms