Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
PDLIM5Q96HC4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PDLIM5Q96HC4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PDLIM5Q96HC4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PDLIM5Q96HC4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PDLIM5Q96HC4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
PDLIM5Q96HC4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PDLIM5Q96HC4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 AC006538.3-201ENST00000612495 578 ntBASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 AC013726.1-201ENST00000563747 2285 ntBASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 AC012508.2-201ENST00000567613 1472 ntBASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDLIM5Q96HC4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 FAM8A3P-201ENST00000427218 844 ntBASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 IGHV3-42-201ENST00000520410 361 ntBASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 SRD5A3P1-201ENST00000603021 949 ntBASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 TSPY26P-202ENST00000565928 3884 ntBASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms