Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 RN7SKP214-201ENST00000364208 315 ntBASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 AC073150.1-201ENST00000450406 1084 ntBASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 SNORD3B-2-202ENST00000571722 791 ntBASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 AC009084.3-201ENST00000623356 437 ntBASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM43Q96BQ3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 RPL18P13-201ENST00000478088 569 ntBASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 MESTP3-201ENST00000503460 968 ntBASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 AC100827.2-201ENST00000563214 1194 ntBASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 MIR4754-201ENST00000582477 89 ntBASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 AC009955.4-201ENST00000597192 544 ntBASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 AL358472.3-201ENST00000608147 415 ntBASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 AP001065.2-201ENST00000617205 644 ntBASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRIM43Q96BQ3 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TRIM43Q96BQ3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TRIM43Q96BQ3 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TRIM43Q96BQ3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms