Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 AP006547.1-201ENST00000563435 692 ntBASIC23.68■■□□□ 1.38
CCNB3Q8WWL7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC23.68■■□□□ 1.38
CCNB3Q8WWL7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC23.68■■□□□ 1.38
CCNB3Q8WWL7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC23.68■■□□□ 1.38
CCNB3Q8WWL7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC23.68■■□□□ 1.38
CCNB3Q8WWL7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCNB3Q8WWL7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCNB3Q8WWL7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCNB3Q8WWL7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCNB3Q8WWL7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC23.68■■□□□ 1.38
CCNB3Q8WWL7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCNB3Q8WWL7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 NUS1P3-201ENST00000423502 862 ntBASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 AL096828.3-201ENST00000615354 462 ntBASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 AL354989.2-201ENST00000435838 1540 ntBASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC23.67■■□□□ 1.38
CCNB3Q8WWL7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 AL139094.1-201ENST00000405549 1188 ntBASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 AP001258.2-201ENST00000529891 490 ntBASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 KC6-205ENST00000599934 556 ntTSL 4 BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 HR-201ENST00000312841 5351 ntTSL 5 BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 AC015818.8-201ENST00000587907 1519 ntBASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCNB3Q8WWL7 CALR4P-201ENST00000431943 946 ntBASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 KRT8P14-201ENST00000414254 1442 ntBASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC23.65■■□□□ 1.38
CCNB3Q8WWL7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCNB3Q8WWL7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
CCNB3Q8WWL7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCNB3Q8WWL7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms