Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 RPL5P21-201ENST00000404620 815 ntBASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 PIN1P1-201ENST00000412108 996 ntBASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCC2Q8TAQ2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 SPDYE19P-201ENST00000338590 713 ntBASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 RPL13P2-201ENST00000440687 659 ntBASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 GNAQP1-201ENST00000444815 1067 ntBASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 SLED1-202ENST00000512051 380 ntBASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 DOC2GP-202ENST00000514950 1163 ntBASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCC2Q8TAQ2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 MROH4P-201ENST00000431302 1578 ntBASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.22■□□□□ 0.51
SMARCC2Q8TAQ2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms