Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 AC013726.1-201ENST00000563747 2285 ntBASIC16.62■□□□□ 0.25
LMO3Q8TAP4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 AC012508.2-201ENST00000567613 1472 ntBASIC16.61■□□□□ 0.25
LMO3Q8TAP4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 INGX-202ENST00000489074 768 ntBASIC16.61■□□□□ 0.25
LMO3Q8TAP4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 SAMD11P1-201ENST00000571429 661 ntBASIC16.61■□□□□ 0.25
LMO3Q8TAP4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.61■□□□□ 0.25
LMO3Q8TAP4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 SERBP1P5-201ENST00000510079 1181 ntBASIC16.6■□□□□ 0.25
LMO3Q8TAP4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 RRP7BP-205ENST00000566851 833 ntBASIC16.6■□□□□ 0.25
LMO3Q8TAP4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 BRI3BPP1-201ENST00000594224 787 ntBASIC16.6■□□□□ 0.25
LMO3Q8TAP4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 LINC01101-201ENST00000622953 1884 ntBASIC16.6■□□□□ 0.25
LMO3Q8TAP4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LMO3Q8TAP4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms