Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 BNIP3P42-201ENST00000454982 569 ntBASIC16.96■□□□□ 0.31
VPS52Q8N1B4 FAM86LP-201ENST00000478302 853 ntBASIC16.96■□□□□ 0.31
VPS52Q8N1B4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 BNIP3P29-201ENST00000598302 571 ntBASIC16.96■□□□□ 0.31
VPS52Q8N1B4 AC011447.5-201ENST00000616168 564 ntBASIC16.96■□□□□ 0.31
VPS52Q8N1B4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS52Q8N1B4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.96■□□□□ 0.3
VPS52Q8N1B4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.96■□□□□ 0.3
VPS52Q8N1B4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
VPS52Q8N1B4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 TDH-203ENST00000531764 1110 ntBASIC16.95■□□□□ 0.3
VPS52Q8N1B4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 AL359711.2-201ENST00000563105 872 ntBASIC16.95■□□□□ 0.3
VPS52Q8N1B4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.95■□□□□ 0.3
VPS52Q8N1B4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 AC092850.2-201ENST00000623821 2697 ntBASIC16.95■□□□□ 0.3
VPS52Q8N1B4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS52Q8N1B4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 ACTG1P3-201ENST00000431775 1114 ntBASIC16.94■□□□□ 0.3
VPS52Q8N1B4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 MIR5189-201ENST00000577370 114 ntBASIC16.94■□□□□ 0.3
VPS52Q8N1B4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS52Q8N1B4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms