Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 MIR943-201ENST00000401286 94 ntBASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 AC092580.3-201ENST00000430932 139 ntBASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 AC241585.1-201ENST00000433527 519 ntBASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 METTL21AP1-201ENST00000438852 635 ntBASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 AC097493.3-201ENST00000509725 367 ntBASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF440Q8IYI8 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 AC023024.2-201ENST00000623561 1993 ntBASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 TREML5P-201ENST00000421694 576 ntBASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 IGHV3-42-201ENST00000520410 361 ntBASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 LINC01115-203ENST00000606068 577 ntBASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 AL590560.3-201ENST00000623350 461 ntBASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 AF228730.6-201ENST00000641497 218 ntBASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 AC084121.3-201ENST00000641716 218 ntBASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 AL161772.1-201ENST00000610494 4412 ntBASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF440Q8IYI8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF440Q8IYI8 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF440Q8IYI8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF440Q8IYI8 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms