Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL451050.2-201ENST00000606967 682 ntBASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 AC007663.3-201ENST00000609632 465 ntBASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS4Q8IUM7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPAS4Q8IUM7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPAS4Q8IUM7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPAS4Q8IUM7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
NPAS4Q8IUM7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
NPAS4Q8IUM7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.52■□□□□ 0.23
NPAS4Q8IUM7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPAS4Q8IUM7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.52■□□□□ 0.23
NPAS4Q8IUM7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 NDUFV2P1-201ENST00000596415 907 ntBASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 AC073413.1-201ENST00000603927 732 ntBASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.51■□□□□ 0.23
NPAS4Q8IUM7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 AC127383.1-201ENST00000444697 1800 ntBASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NPAS4Q8IUM7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms