Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 AC113367.3-201ENST00000508316 1912 ntBASIC13.04□□□□□ -0.32
ZNF546Q86UE3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 AL645939.2-201ENST00000427340 991 ntBASIC13.04□□□□□ -0.32
ZNF546Q86UE3 AC087163.2-201ENST00000457299 853 ntBASIC13.04□□□□□ -0.32
ZNF546Q86UE3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.04□□□□□ -0.32
ZNF546Q86UE3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF546Q86UE3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 LINC00265-3P-201ENST00000447588 903 ntBASIC13.03□□□□□ -0.32
ZNF546Q86UE3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 TPSP2-201ENST00000561760 610 ntBASIC13.03□□□□□ -0.32
ZNF546Q86UE3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 AL731571.1-201ENST00000617058 5428 ntBASIC13.03□□□□□ -0.32
ZNF546Q86UE3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 AC134407.2-201ENST00000625089 1978 ntBASIC13.03□□□□□ -0.32
ZNF546Q86UE3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF546Q86UE3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
ZNF546Q86UE3 MTHFR-210ENST00000641407 2387 ntBASIC13.02□□□□□ -0.32
ZNF546Q86UE3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
ZNF546Q86UE3 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms