Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 AC140658.5-201ENST00000438532 169 ntBASIC15.12■□□□□ 0.01
RNF220Q5VTB9 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 AC034105.1-201ENST00000563488 319 ntBASIC15.12■□□□□ 0.01
RNF220Q5VTB9 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RNF220Q5VTB9 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 AC104109.2-201ENST00000602919 1418 ntBASIC15.11■□□□□ 0.01
RNF220Q5VTB9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF220Q5VTB9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF220Q5VTB9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms