Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.28□□□□□ -0.12
LTBQ06643 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.28□□□□□ -0.12
LTBQ06643 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LTBQ06643 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 COX5BP8-201ENST00000416911 349 ntBASIC14.28□□□□□ -0.12
LTBQ06643 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.28□□□□□ -0.12
LTBQ06643 TREML5P-201ENST00000421694 576 ntBASIC14.28□□□□□ -0.12
LTBQ06643 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.28□□□□□ -0.12
LTBQ06643 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.28□□□□□ -0.12
LTBQ06643 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.28□□□□□ -0.12
LTBQ06643 MIR600HG-201ENST00000449175 5984 ntBASIC14.28□□□□□ -0.12
LTBQ06643 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.28□□□□□ -0.12
LTBQ06643 KRT8P12-202ENST00000472924 1397 ntBASIC14.28□□□□□ -0.12
LTBQ06643 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.28□□□□□ -0.12
LTBQ06643 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.28□□□□□ -0.12
LTBQ06643 IGHV3-71-201ENST00000523324 359 ntBASIC14.28□□□□□ -0.12
LTBQ06643 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.28□□□□□ -0.12
LTBQ06643 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.28□□□□□ -0.12
LTBQ06643 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.28□□□□□ -0.12
LTBQ06643 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
LTBQ06643 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LTBQ06643 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LTBQ06643 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
LTBQ06643 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.28□□□□□ -0.12
LTBQ06643 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LTBQ06643 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LTBQ06643 AL109954.1-202ENST00000564051 2148 ntBASIC14.27□□□□□ -0.12
LTBQ06643 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LTBQ06643 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.27□□□□□ -0.12
LTBQ06643 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.27□□□□□ -0.12
LTBQ06643 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LTBQ06643 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LTBQ06643 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.27□□□□□ -0.12
LTBQ06643 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LTBQ06643 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.27□□□□□ -0.12
LTBQ06643 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.27□□□□□ -0.12
LTBQ06643 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LTBQ06643 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LTBQ06643 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.27□□□□□ -0.12
LTBQ06643 AL035456.1-201ENST00000456064 1369 ntBASIC14.27□□□□□ -0.12
LTBQ06643 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.27□□□□□ -0.13
LTBQ06643 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LTBQ06643 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LTBQ06643 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
LTBQ06643 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LTBQ06643 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LTBQ06643 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.27□□□□□ -0.13
LTBQ06643 FO393414.2-201ENST00000405153 598 ntBASIC14.27□□□□□ -0.13
LTBQ06643 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.27□□□□□ -0.13
LTBQ06643 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.27□□□□□ -0.13
LTBQ06643 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.27□□□□□ -0.13
LTBQ06643 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.27□□□□□ -0.13
LTBQ06643 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.27□□□□□ -0.13
LTBQ06643 AL079307.3-201ENST00000556114 283 ntBASIC14.27□□□□□ -0.13
LTBQ06643 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
LTBQ06643 AC140878.1-201ENST00000565277 250 ntBASIC14.27□□□□□ -0.13
LTBQ06643 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.27□□□□□ -0.13
LTBQ06643 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
LTBQ06643 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LTBQ06643 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LTBQ06643 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LTBQ06643 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LTBQ06643 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LTBQ06643 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.27□□□□□ -0.13
LTBQ06643 AC006486.2-201ENST00000624246 2199 ntBASIC14.27□□□□□ -0.13
LTBQ06643 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
LTBQ06643 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LTBQ06643 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LTBQ06643 AC138035.3-201ENST00000622706 2791 ntBASIC14.27□□□□□ -0.13
LTBQ06643 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LTBQ06643 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LTBQ06643 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LTBQ06643 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.26□□□□□ -0.13
LTBQ06643 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.26□□□□□ -0.13
LTBQ06643 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.26□□□□□ -0.13
LTBQ06643 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.26□□□□□ -0.13
LTBQ06643 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.26□□□□□ -0.13
LTBQ06643 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms