Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SSBP1Q04837 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
SSBP1Q04837 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP1Q04837 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SSBP1Q04837 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.22□□□□□ -0.29
SSBP1Q04837 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SSBP1Q04837 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SSBP1Q04837 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.22□□□□□ -0.29
SSBP1Q04837 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
SSBP1Q04837 RPS2P1-201ENST00000434010 821 ntBASIC13.22□□□□□ -0.29
SSBP1Q04837 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.22□□□□□ -0.29
SSBP1Q04837 AC140658.5-201ENST00000438532 169 ntBASIC13.22□□□□□ -0.29
SSBP1Q04837 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.22□□□□□ -0.29
SSBP1Q04837 SAPCD2P3-201ENST00000455031 850 ntBASIC13.22□□□□□ -0.29
SSBP1Q04837 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.22□□□□□ -0.29
SSBP1Q04837 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.22□□□□□ -0.29
SSBP1Q04837 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.22□□□□□ -0.29
SSBP1Q04837 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.22□□□□□ -0.29
SSBP1Q04837 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.22□□□□□ -0.29
SSBP1Q04837 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.22□□□□□ -0.29
SSBP1Q04837 SPTSSB-204ENST00000617024 1292 ntBASIC13.22□□□□□ -0.29
SSBP1Q04837 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 AL161645.1-201ENST00000622716 1255 ntBASIC13.22□□□□□ -0.29
SSBP1Q04837 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
SSBP1Q04837 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 AC018442.1-201ENST00000421439 2061 ntBASIC13.22□□□□□ -0.29
SSBP1Q04837 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP1Q04837 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP1Q04837 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.22□□□□□ -0.29
SSBP1Q04837 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SSBP1Q04837 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SSBP1Q04837 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP1Q04837 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
SSBP1Q04837 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP1Q04837 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.21□□□□□ -0.29
SSBP1Q04837 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP1Q04837 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.21□□□□□ -0.29
SSBP1Q04837 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP1Q04837 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP1Q04837 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP1Q04837 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
SSBP1Q04837 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP1Q04837 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.21□□□□□ -0.29
SSBP1Q04837 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP1Q04837 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP1Q04837 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SSBP1Q04837 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP1Q04837 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP1Q04837 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.21□□□□□ -0.29
SSBP1Q04837 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP1Q04837 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SSBP1Q04837 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.21□□□□□ -0.29
SSBP1Q04837 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.21□□□□□ -0.29
SSBP1Q04837 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SSBP1Q04837 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
SSBP1Q04837 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP1Q04837 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP1Q04837 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.21□□□□□ -0.29
SSBP1Q04837 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SSBP1Q04837 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP1Q04837 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP1Q04837 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.21□□□□□ -0.29
SSBP1Q04837 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP1Q04837 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.21□□□□□ -0.29
SSBP1Q04837 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.21□□□□□ -0.29
SSBP1Q04837 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
SSBP1Q04837 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.21□□□□□ -0.29
SSBP1Q04837 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.21□□□□□ -0.29
SSBP1Q04837 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP1Q04837 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.21□□□□□ -0.29
SSBP1Q04837 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP1Q04837 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SSBP1Q04837 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP1Q04837 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.21□□□□□ -0.3
SSBP1Q04837 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP1Q04837 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.21□□□□□ -0.3
SSBP1Q04837 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.21□□□□□ -0.3
SSBP1Q04837 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.21□□□□□ -0.3
SSBP1Q04837 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.21□□□□□ -0.3
SSBP1Q04837 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP1Q04837 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP1Q04837 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP1Q04837 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP1Q04837 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP1Q04837 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.21□□□□□ -0.3
SSBP1Q04837 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms