Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDK3Q00526 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.27■□□□□ 0.04
CDK3Q00526 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDK3Q00526 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDK3Q00526 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDK3Q00526 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.27■□□□□ 0.04
CDK3Q00526 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDK3Q00526 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CDK3Q00526 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDK3Q00526 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDK3Q00526 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDK3Q00526 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDK3Q00526 ACKR1-201ENST00000368121 1240 ntBASIC15.27■□□□□ 0.04
CDK3Q00526 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDK3Q00526 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.27■□□□□ 0.04
CDK3Q00526 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDK3Q00526 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.27■□□□□ 0.04
CDK3Q00526 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.27■□□□□ 0.04
CDK3Q00526 ATP5G2P4-201ENST00000442175 420 ntBASIC15.27■□□□□ 0.04
CDK3Q00526 AC012441.1-201ENST00000446669 685 ntBASIC15.27■□□□□ 0.04
CDK3Q00526 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.27■□□□□ 0.04
CDK3Q00526 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDK3Q00526 AC022137.2-201ENST00000503482 481 ntBASIC15.27■□□□□ 0.04
CDK3Q00526 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.27■□□□□ 0.04
CDK3Q00526 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.27■□□□□ 0.04
CDK3Q00526 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.27■□□□□ 0.04
CDK3Q00526 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.27■□□□□ 0.04
CDK3Q00526 AL022328.1-201ENST00000610050 478 ntBASIC15.27■□□□□ 0.04
CDK3Q00526 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.27■□□□□ 0.04
CDK3Q00526 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDK3Q00526 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.27■□□□□ 0.03
CDK3Q00526 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDK3Q00526 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDK3Q00526 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.27■□□□□ 0.03
CDK3Q00526 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDK3Q00526 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDK3Q00526 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.27■□□□□ 0.03
CDK3Q00526 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDK3Q00526 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CDK3Q00526 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDK3Q00526 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.26■□□□□ 0.03
CDK3Q00526 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 AC134312.5-201ENST00000568031 1313 ntBASIC15.26■□□□□ 0.03
CDK3Q00526 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
CDK3Q00526 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.26■□□□□ 0.03
CDK3Q00526 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.26■□□□□ 0.03
CDK3Q00526 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CDK3Q00526 AC005229.1-201ENST00000392885 409 ntBASIC15.26■□□□□ 0.03
CDK3Q00526 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 KRT43P-201ENST00000434019 910 ntBASIC15.26■□□□□ 0.03
CDK3Q00526 AC234783.1-201ENST00000441761 496 ntBASIC15.26■□□□□ 0.03
CDK3Q00526 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.26■□□□□ 0.03
CDK3Q00526 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.26■□□□□ 0.03
CDK3Q00526 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.26■□□□□ 0.03
CDK3Q00526 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.26■□□□□ 0.03
CDK3Q00526 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 AL512343.1-201ENST00000605837 169 ntBASIC15.26■□□□□ 0.03
CDK3Q00526 BX539320.1-201ENST00000623759 877 ntBASIC15.26■□□□□ 0.03
CDK3Q00526 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CDK3Q00526 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CDK3Q00526 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.26■□□□□ 0.03
CDK3Q00526 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.26■□□□□ 0.03
CDK3Q00526 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CDK3Q00526 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.26■□□□□ 0.03
CDK3Q00526 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK3Q00526 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.25■□□□□ 0.03
CDK3Q00526 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
CDK3Q00526 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDK3Q00526 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 TNRC18P3-201ENST00000441896 2691 ntBASIC15.25■□□□□ 0.03
CDK3Q00526 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CDK3Q00526 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.25■□□□□ 0.03
CDK3Q00526 AC007950.2-201ENST00000615045 2347 ntBASIC15.25■□□□□ 0.03
CDK3Q00526 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms