Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.43□□□□□ -0.1
SMIM11AP58511 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM11AP58511 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SMIM11AP58511 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.43□□□□□ -0.1
SMIM11AP58511 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.43□□□□□ -0.1
SMIM11AP58511 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.43□□□□□ -0.1
SMIM11AP58511 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SMIM11AP58511 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11AP58511 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11AP58511 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.42□□□□□ -0.1
SMIM11AP58511 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.42□□□□□ -0.1
SMIM11AP58511 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11AP58511 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11AP58511 LINC00528-201ENST00000600723 2160 ntBASIC14.42□□□□□ -0.1
SMIM11AP58511 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11AP58511 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11AP58511 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11AP58511 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
SMIM11AP58511 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SMIM11AP58511 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.42□□□□□ -0.1
SMIM11AP58511 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
SMIM11AP58511 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.42□□□□□ -0.1
SMIM11AP58511 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.42□□□□□ -0.1
SMIM11AP58511 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.42□□□□□ -0.1
SMIM11AP58511 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.42□□□□□ -0.1
SMIM11AP58511 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.42□□□□□ -0.1
SMIM11AP58511 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.42□□□□□ -0.1
SMIM11AP58511 AC091812.2-201ENST00000619081 385 ntBASIC14.42□□□□□ -0.1
SMIM11AP58511 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.42□□□□□ -0.1
SMIM11AP58511 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SMIM11AP58511 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.42□□□□□ -0.1
SMIM11AP58511 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11AP58511 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
SMIM11AP58511 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.42□□□□□ -0.1
SMIM11AP58511 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SMIM11AP58511 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.42□□□□□ -0.1
SMIM11AP58511 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.42□□□□□ -0.1
SMIM11AP58511 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11AP58511 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM11AP58511 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.42□□□□□ -0.1
SMIM11AP58511 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SMIM11AP58511 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.41□□□□□ -0.1
SMIM11AP58511 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.41□□□□□ -0.1
SMIM11AP58511 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.41□□□□□ -0.1
SMIM11AP58511 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
SMIM11AP58511 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.41□□□□□ -0.1
SMIM11AP58511 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SMIM11AP58511 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.41□□□□□ -0.1
SMIM11AP58511 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
SMIM11AP58511 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.41□□□□□ -0.1
SMIM11AP58511 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.41□□□□□ -0.1
SMIM11AP58511 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 AL607033.1-201ENST00000623900 1599 ntBASIC14.41□□□□□ -0.1
SMIM11AP58511 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
SMIM11AP58511 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.41□□□□□ -0.1
SMIM11AP58511 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SMIM11AP58511 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.41□□□□□ -0.1
SMIM11AP58511 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.41□□□□□ -0.1
SMIM11AP58511 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM11AP58511 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11AP58511 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11AP58511 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SMIM11AP58511 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11AP58511 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11AP58511 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11AP58511 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11AP58511 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SMIM11AP58511 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11AP58511 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11AP58511 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11AP58511 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SMIM11AP58511 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.4□□□□□ -0.1
SMIM11AP58511 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.4□□□□□ -0.1
SMIM11AP58511 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
SMIM11AP58511 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11AP58511 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SMIM11AP58511 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11AP58511 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM11AP58511 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms