Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PER3P56645 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PER3P56645 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PER3P56645 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PER3P56645 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PER3P56645 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PER3P56645 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PER3P56645 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.53□□□□□ -0.08
PER3P56645 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.53□□□□□ -0.08
PER3P56645 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.53□□□□□ -0.08
PER3P56645 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.53□□□□□ -0.08
PER3P56645 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PER3P56645 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PER3P56645 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.53□□□□□ -0.08
PER3P56645 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PER3P56645 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.53□□□□□ -0.08
PER3P56645 PCGF3-213ENST00000620529 1899 ntBASIC14.53□□□□□ -0.08
PER3P56645 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.53□□□□□ -0.08
PER3P56645 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PER3P56645 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PER3P56645 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.53□□□□□ -0.08
PER3P56645 AL133338.1-201ENST00000565695 1517 ntBASIC14.53□□□□□ -0.08
PER3P56645 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.53□□□□□ -0.08
PER3P56645 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PER3P56645 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PER3P56645 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.53□□□□□ -0.08
PER3P56645 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PER3P56645 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PER3P56645 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PER3P56645 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PER3P56645 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.53□□□□□ -0.08
PER3P56645 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.53□□□□□ -0.08
PER3P56645 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.53□□□□□ -0.08
PER3P56645 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.53□□□□□ -0.08
PER3P56645 AC093724.1-201ENST00000448659 1027 ntBASIC14.53□□□□□ -0.08
PER3P56645 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.53□□□□□ -0.08
PER3P56645 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
PER3P56645 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
PER3P56645 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.53□□□□□ -0.08
PER3P56645 AC015936.2-201ENST00000593177 259 ntBASIC14.53□□□□□ -0.08
PER3P56645 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PER3P56645 AL512343.1-201ENST00000605837 169 ntBASIC14.53□□□□□ -0.08
PER3P56645 AL606495.2-201ENST00000605867 535 ntBASIC14.53□□□□□ -0.08
PER3P56645 AC084346.2-201ENST00000607097 949 ntBASIC14.53□□□□□ -0.08
PER3P56645 COX11-210ENST00000639671 696 ntBASIC14.53□□□□□ -0.08
PER3P56645 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PER3P56645 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.53□□□□□ -0.08
PER3P56645 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PER3P56645 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PER3P56645 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.53□□□□□ -0.08
PER3P56645 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PER3P56645 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PER3P56645 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PER3P56645 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.53□□□□□ -0.08
PER3P56645 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PER3P56645 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PER3P56645 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PER3P56645 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PER3P56645 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PER3P56645 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
PER3P56645 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PER3P56645 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PER3P56645 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.52□□□□□ -0.08
PER3P56645 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
PER3P56645 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.52□□□□□ -0.08
PER3P56645 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.52□□□□□ -0.08
PER3P56645 AP002414.2-201ENST00000591780 3365 ntBASIC14.52□□□□□ -0.08
PER3P56645 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.52□□□□□ -0.08
PER3P56645 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PER3P56645 AC013268.4-201ENST00000637413 2228 ntBASIC14.52□□□□□ -0.08
PER3P56645 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.52□□□□□ -0.08
PER3P56645 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PER3P56645 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PER3P56645 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PER3P56645 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
PER3P56645 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PER3P56645 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PER3P56645 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.52□□□□□ -0.09
PER3P56645 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PER3P56645 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.52□□□□□ -0.09
PER3P56645 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PER3P56645 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PER3P56645 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.52□□□□□ -0.09
PER3P56645 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PER3P56645 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.52□□□□□ -0.09
PER3P56645 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.52□□□□□ -0.09
PER3P56645 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.52□□□□□ -0.09
PER3P56645 AC123567.1-201ENST00000548294 1261 ntBASIC14.52□□□□□ -0.09
PER3P56645 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PER3P56645 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.52□□□□□ -0.09
PER3P56645 AC044860.1-202ENST00000559481 777 ntBASIC14.52□□□□□ -0.09
PER3P56645 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.52□□□□□ -0.09
PER3P56645 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.52□□□□□ -0.09
PER3P56645 AC093726.1-201ENST00000608064 963 ntBASIC14.52□□□□□ -0.09
PER3P56645 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.52□□□□□ -0.09
PER3P56645 MIR6069-201ENST00000620069 79 ntBASIC14.52□□□□□ -0.09
PER3P56645 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.52□□□□□ -0.09
PER3P56645 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PER3P56645 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PER3P56645 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms