Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH15P55291 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH15P55291 DGCR9-201ENST00000609630 2415 ntBASIC14.65□□□□□ -0.06
CDH15P55291 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH15P55291 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH15P55291 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH15P55291 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH15P55291 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH15P55291 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH15P55291 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH15P55291 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH15P55291 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH15P55291 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH15P55291 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CDH15P55291 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH15P55291 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH15P55291 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.07
CDH15P55291 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH15P55291 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDH15P55291 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CDH15P55291 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDH15P55291 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CDH15P55291 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH15P55291 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH15P55291 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.64□□□□□ -0.07
CDH15P55291 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH15P55291 PAWRP1-201ENST00000451083 565 ntBASIC14.64□□□□□ -0.07
CDH15P55291 KRT18P3-201ENST00000451602 1288 ntBASIC14.64□□□□□ -0.07
CDH15P55291 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
CDH15P55291 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH15P55291 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH15P55291 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH15P55291 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.64□□□□□ -0.07
CDH15P55291 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
CDH15P55291 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDH15P55291 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDH15P55291 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.64□□□□□ -0.07
CDH15P55291 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH15P55291 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDH15P55291 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
CDH15P55291 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDH15P55291 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH15P55291 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 REXO1L2P-201ENST00000425429 2069 ntBASIC14.64□□□□□ -0.07
CDH15P55291 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH15P55291 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDH15P55291 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH15P55291 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH15P55291 AP002414.3-201ENST00000589352 1468 ntBASIC14.63□□□□□ -0.07
CDH15P55291 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH15P55291 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH15P55291 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH15P55291 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH15P55291 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH15P55291 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.63□□□□□ -0.07
CDH15P55291 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH15P55291 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH15P55291 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH15P55291 UNC93B6-202ENST00000528242 690 ntBASIC14.63□□□□□ -0.07
CDH15P55291 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH15P55291 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH15P55291 AC006557.2-201ENST00000592985 1240 ntBASIC14.63□□□□□ -0.07
CDH15P55291 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH15P55291 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH15P55291 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms