Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RHOQP3-201ENST00000437982 621 ntBASIC14.89□□□□□ -0.03
NR1H2P55055 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.89□□□□□ -0.03
NR1H2P55055 CXCL1P1-201ENST00000502804 216 ntBASIC14.89□□□□□ -0.03
NR1H2P55055 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.89□□□□□ -0.03
NR1H2P55055 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
NR1H2P55055 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.89□□□□□ -0.03
NR1H2P55055 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.89□□□□□ -0.03
NR1H2P55055 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.89□□□□□ -0.03
NR1H2P55055 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.89□□□□□ -0.03
NR1H2P55055 AL513190.1-201ENST00000621254 727 ntBASIC14.89□□□□□ -0.03
NR1H2P55055 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.89□□□□□ -0.03
NR1H2P55055 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
NR1H2P55055 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
NR1H2P55055 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.89□□□□□ -0.03
NR1H2P55055 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.89□□□□□ -0.03
NR1H2P55055 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.89□□□□□ -0.03
NR1H2P55055 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NR1H2P55055 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.88□□□□□ -0.03
NR1H2P55055 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NR1H2P55055 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 ELL2P1-201ENST00000413990 1906 ntBASIC14.88□□□□□ -0.03
NR1H2P55055 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.88□□□□□ -0.03
NR1H2P55055 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.88□□□□□ -0.03
NR1H2P55055 AC126365.1-201ENST00000578585 1514 ntBASIC14.88□□□□□ -0.03
NR1H2P55055 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.88□□□□□ -0.03
NR1H2P55055 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.88□□□□□ -0.03
NR1H2P55055 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
NR1H2P55055 ALG1L5P-201ENST00000482043 771 ntBASIC14.88□□□□□ -0.03
NR1H2P55055 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.88□□□□□ -0.03
NR1H2P55055 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.88□□□□□ -0.03
NR1H2P55055 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.88□□□□□ -0.03
NR1H2P55055 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.88□□□□□ -0.03
NR1H2P55055 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.88□□□□□ -0.03
NR1H2P55055 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.88□□□□□ -0.03
NR1H2P55055 KRT19P2-202ENST00000557173 1012 ntBASIC14.88□□□□□ -0.03
NR1H2P55055 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.88□□□□□ -0.03
NR1H2P55055 AC067750.1-201ENST00000608826 6545 ntBASIC14.88□□□□□ -0.03
NR1H2P55055 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NR1H2P55055 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
NR1H2P55055 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NR1H2P55055 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H2P55055 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
NR1H2P55055 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 SLC22A20-204ENST00000530038 1673 ntBASIC14.87□□□□□ -0.03
NR1H2P55055 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.87□□□□□ -0.03
NR1H2P55055 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NR1H2P55055 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NR1H2P55055 KRT8P44-201ENST00000441609 1350 ntBASIC14.87□□□□□ -0.03
NR1H2P55055 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NR1H2P55055 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NR1H2P55055 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NR1H2P55055 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.87□□□□□ -0.03
NR1H2P55055 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NR1H2P55055 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.87□□□□□ -0.03
NR1H2P55055 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
NR1H2P55055 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NR1H2P55055 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.87□□□□□ -0.03
NR1H2P55055 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.87□□□□□ -0.03
NR1H2P55055 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
NR1H2P55055 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms