Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.61□□□□□ -0.23
ATP1B3P54709 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.61□□□□□ -0.23
ATP1B3P54709 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ATP1B3P54709 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.61□□□□□ -0.23
ATP1B3P54709 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.61□□□□□ -0.23
ATP1B3P54709 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.61□□□□□ -0.23
ATP1B3P54709 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.61□□□□□ -0.23
ATP1B3P54709 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.61□□□□□ -0.23
ATP1B3P54709 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.61□□□□□ -0.23
ATP1B3P54709 AC055717.3-201ENST00000622967 595 ntBASIC13.61□□□□□ -0.23
ATP1B3P54709 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ATP1B3P54709 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.61□□□□□ -0.23
ATP1B3P54709 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
ATP1B3P54709 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.61□□□□□ -0.23
ATP1B3P54709 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ATP1B3P54709 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.61□□□□□ -0.23
ATP1B3P54709 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.61□□□□□ -0.23
ATP1B3P54709 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
ATP1B3P54709 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATP1B3P54709 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
ATP1B3P54709 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.6□□□□□ -0.23
ATP1B3P54709 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATP1B3P54709 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.6□□□□□ -0.23
ATP1B3P54709 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATP1B3P54709 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ATP1B3P54709 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
ATP1B3P54709 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATP1B3P54709 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.6□□□□□ -0.23
ATP1B3P54709 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATP1B3P54709 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ATP1B3P54709 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.6□□□□□ -0.23
ATP1B3P54709 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATP1B3P54709 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ATP1B3P54709 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATP1B3P54709 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATP1B3P54709 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ATP1B3P54709 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATP1B3P54709 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATP1B3P54709 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ATP1B3P54709 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.6□□□□□ -0.23
ATP1B3P54709 HTR5BP-201ENST00000430851 1154 ntBASIC13.6□□□□□ -0.23
ATP1B3P54709 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.6□□□□□ -0.23
ATP1B3P54709 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.6□□□□□ -0.23
ATP1B3P54709 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.6□□□□□ -0.23
ATP1B3P54709 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.6□□□□□ -0.23
ATP1B3P54709 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.6□□□□□ -0.23
ATP1B3P54709 SLC25A39P2-201ENST00000537614 270 ntBASIC13.6□□□□□ -0.23
ATP1B3P54709 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.6□□□□□ -0.23
ATP1B3P54709 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.6□□□□□ -0.23
ATP1B3P54709 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.6□□□□□ -0.23
ATP1B3P54709 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ATP1B3P54709 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.6□□□□□ -0.23
ATP1B3P54709 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.6□□□□□ -0.23
ATP1B3P54709 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ATP1B3P54709 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.6□□□□□ -0.23
ATP1B3P54709 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ATP1B3P54709 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.6□□□□□ -0.23
ATP1B3P54709 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.6□□□□□ -0.23
ATP1B3P54709 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATP1B3P54709 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATP1B3P54709 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATP1B3P54709 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ATP1B3P54709 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.6□□□□□ -0.23
ATP1B3P54709 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATP1B3P54709 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
ATP1B3P54709 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATP1B3P54709 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATP1B3P54709 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATP1B3P54709 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATP1B3P54709 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.59□□□□□ -0.23
ATP1B3P54709 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.59□□□□□ -0.23
ATP1B3P54709 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
ATP1B3P54709 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ATP1B3P54709 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
ATP1B3P54709 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATP1B3P54709 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms