Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNA2D1P54289 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNA2D1P54289 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNA2D1P54289 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNA2D1P54289 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNA2D1P54289 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 RN7SL752P-201ENST00000463779 287 ntBASIC16.54■□□□□ 0.24
CACNA2D1P54289 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CACNA2D1P54289 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 RPSAP52-203ENST00000622976 1023 ntBASIC16.54■□□□□ 0.24
CACNA2D1P54289 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNA2D1P54289 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CACNA2D1P54289 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNA2D1P54289 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.54■□□□□ 0.24
CACNA2D1P54289 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNA2D1P54289 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNA2D1P54289 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNA2D1P54289 CU639417.3-201ENST00000624240 1404 ntBASIC16.53■□□□□ 0.24
CACNA2D1P54289 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CACNA2D1P54289 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CACNA2D1P54289 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CACNA2D1P54289 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CACNA2D1P54289 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CACNA2D1P54289 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CACNA2D1P54289 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CACNA2D1P54289 AC098614.1-201ENST00000368528 745 ntBASIC16.53■□□□□ 0.24
CACNA2D1P54289 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 RN7SL837P-201ENST00000463010 287 ntBASIC16.53■□□□□ 0.24
CACNA2D1P54289 KRT18P43-201ENST00000469825 1281 ntBASIC16.53■□□□□ 0.24
CACNA2D1P54289 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.53■□□□□ 0.24
CACNA2D1P54289 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 BRI3BPP1-201ENST00000594224 787 ntBASIC16.53■□□□□ 0.24
CACNA2D1P54289 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 AC000095.1-201ENST00000603208 874 ntBASIC16.53■□□□□ 0.24
CACNA2D1P54289 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CACNA2D1P54289 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CACNA2D1P54289 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CACNA2D1P54289 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.53■□□□□ 0.24
CACNA2D1P54289 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CACNA2D1P54289 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CACNA2D1P54289 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA2D1P54289 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA2D1P54289 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CACNA2D1P54289 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CACNA2D1P54289 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CACNA2D1P54289 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA2D1P54289 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.52■□□□□ 0.24
CACNA2D1P54289 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA2D1P54289 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.52■□□□□ 0.24
CACNA2D1P54289 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA2D1P54289 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA2D1P54289 AC063926.2-201ENST00000623766 1308 ntBASIC16.52■□□□□ 0.24
CACNA2D1P54289 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA2D1P54289 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA2D1P54289 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA2D1P54289 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA2D1P54289 CR383656.12-201ENST00000549567 513 ntBASIC16.52■□□□□ 0.24
CACNA2D1P54289 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.52■□□□□ 0.24
CACNA2D1P54289 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.52■□□□□ 0.24
CACNA2D1P54289 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CACNA2D1P54289 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms