Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A2P43354 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NR4A2P43354 AC092919.2-201ENST00000623631 1645 ntBASIC14.29□□□□□ -0.12
NR4A2P43354 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A2P43354 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A2P43354 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.29□□□□□ -0.12
NR4A2P43354 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.29□□□□□ -0.12
NR4A2P43354 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NR4A2P43354 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A2P43354 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A2P43354 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A2P43354 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.29□□□□□ -0.12
NR4A2P43354 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A2P43354 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.29□□□□□ -0.12
NR4A2P43354 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.29□□□□□ -0.12
NR4A2P43354 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A2P43354 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.29□□□□□ -0.12
NR4A2P43354 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A2P43354 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A2P43354 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NR4A2P43354 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A2P43354 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A2P43354 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A2P43354 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A2P43354 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 AL139385.1-201ENST00000611744 3272 ntBASIC14.28□□□□□ -0.12
NR4A2P43354 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.28□□□□□ -0.12
NR4A2P43354 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.28□□□□□ -0.12
NR4A2P43354 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
NR4A2P43354 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NR4A2P43354 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 AC002056.1-201ENST00000395613 760 ntBASIC14.28□□□□□ -0.12
NR4A2P43354 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NR4A2P43354 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
NR4A2P43354 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.28□□□□□ -0.12
NR4A2P43354 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.28□□□□□ -0.12
NR4A2P43354 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.28□□□□□ -0.12
NR4A2P43354 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.28□□□□□ -0.12
NR4A2P43354 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.28□□□□□ -0.12
NR4A2P43354 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.28□□□□□ -0.12
NR4A2P43354 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.28□□□□□ -0.12
NR4A2P43354 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.28□□□□□ -0.12
NR4A2P43354 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NR4A2P43354 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.28□□□□□ -0.12
NR4A2P43354 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.28□□□□□ -0.12
NR4A2P43354 AC004449.1-201ENST00000564240 433 ntBASIC14.28□□□□□ -0.12
NR4A2P43354 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.28□□□□□ -0.12
NR4A2P43354 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.28□□□□□ -0.12
NR4A2P43354 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.28□□□□□ -0.12
NR4A2P43354 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.28□□□□□ -0.12
NR4A2P43354 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.28□□□□□ -0.12
NR4A2P43354 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.28□□□□□ -0.12
NR4A2P43354 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A2P43354 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NR4A2P43354 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.27□□□□□ -0.12
NR4A2P43354 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NR4A2P43354 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NR4A2P43354 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NR4A2P43354 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NR4A2P43354 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NR4A2P43354 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NR4A2P43354 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NR4A2P43354 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
NR4A2P43354 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NR4A2P43354 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NR4A2P43354 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NR4A2P43354 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NR4A2P43354 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
NR4A2P43354 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NR4A2P43354 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NR4A2P43354 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NR4A2P43354 AL139400.1-201ENST00000366220 510 ntBASIC14.27□□□□□ -0.13
NR4A2P43354 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NR4A2P43354 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NR4A2P43354 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.27□□□□□ -0.13
NR4A2P43354 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.27□□□□□ -0.13
NR4A2P43354 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.27□□□□□ -0.13
NR4A2P43354 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NR4A2P43354 AC022145.2-201ENST00000598203 171 ntBASIC14.27□□□□□ -0.13
NR4A2P43354 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.27□□□□□ -0.13
NR4A2P43354 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms