Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.28■□□□□ 0.2
MTHFRP42898 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.28■□□□□ 0.2
MTHFRP42898 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MTHFRP42898 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.28■□□□□ 0.2
MTHFRP42898 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.28■□□□□ 0.2
MTHFRP42898 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MTHFRP42898 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MTHFRP42898 FNTAP2-201ENST00000430308 634 ntBASIC16.28■□□□□ 0.2
MTHFRP42898 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MTHFRP42898 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MTHFRP42898 BX284668.4-201ENST00000453917 508 ntBASIC16.28■□□□□ 0.2
MTHFRP42898 AC079328.1-201ENST00000560358 952 ntBASIC16.28■□□□□ 0.2
MTHFRP42898 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
MTHFRP42898 AC015967.2-201ENST00000624092 234 ntBASIC16.28■□□□□ 0.2
MTHFRP42898 AC006435.4-201ENST00000625037 234 ntBASIC16.28■□□□□ 0.2
MTHFRP42898 AL356737.1-201ENST00000634391 234 ntBASIC16.28■□□□□ 0.2
MTHFRP42898 AC006453.4-201ENST00000636949 1252 ntBASIC16.28■□□□□ 0.2
MTHFRP42898 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.28■□□□□ 0.2
MTHFRP42898 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.28■□□□□ 0.2
MTHFRP42898 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.28■□□□□ 0.2
MTHFRP42898 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
MTHFRP42898 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MTHFRP42898 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MTHFRP42898 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MTHFRP42898 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MTHFRP42898 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MTHFRP42898 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MTHFRP42898 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MTHFRP42898 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MTHFRP42898 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MTHFRP42898 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MTHFRP42898 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
MTHFRP42898 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
MTHFRP42898 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
MTHFRP42898 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MTHFRP42898 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.27■□□□□ 0.2
MTHFRP42898 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MTHFRP42898 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MTHFRP42898 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MTHFRP42898 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MTHFRP42898 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MTHFRP42898 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.27■□□□□ 0.2
MTHFRP42898 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
MTHFRP42898 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MTHFRP42898 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MTHFRP42898 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MTHFRP42898 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MTHFRP42898 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
MTHFRP42898 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.27■□□□□ 0.2
MTHFRP42898 AC005077.2-201ENST00000449786 690 ntBASIC16.27■□□□□ 0.2
MTHFRP42898 RPSAP36-202ENST00000494591 1261 ntBASIC16.27■□□□□ 0.2
MTHFRP42898 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.27■□□□□ 0.2
MTHFRP42898 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.27■□□□□ 0.2
MTHFRP42898 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.27■□□□□ 0.2
MTHFRP42898 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MTHFRP42898 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.2
MTHFRP42898 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MTHFRP42898 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.27■□□□□ 0.2
MTHFRP42898 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
MTHFRP42898 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MTHFRP42898 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MTHFRP42898 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MTHFRP42898 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MTHFRP42898 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.27■□□□□ 0.19
MTHFRP42898 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MTHFRP42898 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MTHFRP42898 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.27■□□□□ 0.19
MTHFRP42898 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MTHFRP42898 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
MTHFRP42898 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MTHFRP42898 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.27■□□□□ 0.19
MTHFRP42898 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFRP42898 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFRP42898 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
MTHFRP42898 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MTHFRP42898 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.26■□□□□ 0.19
MTHFRP42898 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.26■□□□□ 0.19
MTHFRP42898 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFRP42898 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFRP42898 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.26■□□□□ 0.19
MTHFRP42898 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
MTHFRP42898 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MTHFRP42898 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.26■□□□□ 0.19
MTHFRP42898 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFRP42898 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.26■□□□□ 0.19
MTHFRP42898 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
MTHFRP42898 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.26■□□□□ 0.19
MTHFRP42898 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFRP42898 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
MTHFRP42898 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFRP42898 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFRP42898 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFRP42898 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFRP42898 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.26■□□□□ 0.19
MTHFRP42898 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.26■□□□□ 0.19
MTHFRP42898 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.26■□□□□ 0.19
MTHFRP42898 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.26■□□□□ 0.19
MTHFRP42898 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.26■□□□□ 0.19
MTHFRP42898 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.26■□□□□ 0.19
MTHFRP42898 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms