Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CXCL5P42830 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CXCL5P42830 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CXCL5P42830 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CXCL5P42830 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CXCL5P42830 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC10.59□□□□□ -0.71
CXCL5P42830 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC10.59□□□□□ -0.71
CXCL5P42830 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC10.59□□□□□ -0.71
CXCL5P42830 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
CXCL5P42830 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CXCL5P42830 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CXCL5P42830 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CXCL5P42830 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC10.59□□□□□ -0.71
CXCL5P42830 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CXCL5P42830 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CXCL5P42830 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC10.59□□□□□ -0.71
CXCL5P42830 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CXCL5P42830 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
CXCL5P42830 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
CXCL5P42830 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.71
CXCL5P42830 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
CXCL5P42830 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
CXCL5P42830 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC10.58□□□□□ -0.72
CXCL5P42830 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC10.58□□□□□ -0.72
CXCL5P42830 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
CXCL5P42830 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC10.58□□□□□ -0.72
CXCL5P42830 PID1-202ENST00000392054 2745 ntTSL 2 BASIC10.58□□□□□ -0.72
CXCL5P42830 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
CXCL5P42830 AC107918.4-201ENST00000641966 3141 ntBASIC10.58□□□□□ -0.72
CXCL5P42830 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
CXCL5P42830 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
CXCL5P42830 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC10.58□□□□□ -0.72
CXCL5P42830 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC10.58□□□□□ -0.72
CXCL5P42830 AC232323.1-201ENST00000540724 2099 ntBASIC10.58□□□□□ -0.72
CXCL5P42830 REXO1L5P-201ENST00000622260 2098 ntBASIC10.58□□□□□ -0.72
CXCL5P42830 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC10.58□□□□□ -0.72
CXCL5P42830 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC10.58□□□□□ -0.72
CXCL5P42830 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC10.58□□□□□ -0.72
CXCL5P42830 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
CXCL5P42830 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 AC004987.2-201ENST00000395959 1148 ntBASIC10.58□□□□□ -0.72
CXCL5P42830 DDT-204ENST00000404092 805 ntTSL 3 BASIC10.58□□□□□ -0.72
CXCL5P42830 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC10.58□□□□□ -0.72
CXCL5P42830 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC10.58□□□□□ -0.72
CXCL5P42830 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC10.58□□□□□ -0.72
CXCL5P42830 FAM197Y8-203ENST00000450145 560 ntBASIC10.58□□□□□ -0.72
CXCL5P42830 AC098859.1-201ENST00000502915 1238 ntBASIC10.58□□□□□ -0.72
CXCL5P42830 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC10.58□□□□□ -0.72
CXCL5P42830 KRT18P35-201ENST00000510488 1269 ntBASIC10.58□□□□□ -0.72
CXCL5P42830 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
CXCL5P42830 SDHD-206ENST00000528182 754 ntTSL 3 BASIC10.58□□□□□ -0.72
CXCL5P42830 UNC93B6-202ENST00000528242 690 ntBASIC10.58□□□□□ -0.72
CXCL5P42830 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
CXCL5P42830 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
CXCL5P42830 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC10.58□□□□□ -0.72
CXCL5P42830 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC10.58□□□□□ -0.72
CXCL5P42830 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC10.58□□□□□ -0.72
CXCL5P42830 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
CXCL5P42830 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 USP3-204ENST00000540797 5474 ntTSL 2 BASIC10.58□□□□□ -0.72
CXCL5P42830 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC10.58□□□□□ -0.72
CXCL5P42830 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC10.58□□□□□ -0.72
CXCL5P42830 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
CXCL5P42830 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC10.58□□□□□ -0.72
CXCL5P42830 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
CXCL5P42830 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
CXCL5P42830 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC10.58□□□□□ -0.72
CXCL5P42830 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC10.58□□□□□ -0.72
CXCL5P42830 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CXCL5P42830 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms