Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFC4P35249 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFC4P35249 AL136309.1-201ENST00000403917 691 ntBASIC19.34■□□□□ 0.69
RFC4P35249 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC19.34■□□□□ 0.69
RFC4P35249 RPL17P11-201ENST00000417593 544 ntBASIC19.34■□□□□ 0.69
RFC4P35249 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC19.34■□□□□ 0.69
RFC4P35249 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC19.34■□□□□ 0.69
RFC4P35249 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC19.34■□□□□ 0.69
RFC4P35249 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC19.34■□□□□ 0.69
RFC4P35249 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19.34■□□□□ 0.69
RFC4P35249 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RFC4P35249 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFC4P35249 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
RFC4P35249 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.34■□□□□ 0.69
RFC4P35249 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFC4P35249 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFC4P35249 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFC4P35249 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFC4P35249 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.34■□□□□ 0.69
RFC4P35249 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RFC4P35249 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RFC4P35249 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RFC4P35249 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RFC4P35249 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RFC4P35249 AC006480.2-201ENST00000609770 1337 ntBASIC19.33■□□□□ 0.69
RFC4P35249 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RFC4P35249 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.33■□□□□ 0.69
RFC4P35249 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RFC4P35249 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFC4P35249 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFC4P35249 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFC4P35249 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RFC4P35249 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFC4P35249 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RFC4P35249 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC19.33■□□□□ 0.68
RFC4P35249 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RFC4P35249 AC008267.1-201ENST00000474858 1069 ntBASIC19.33■□□□□ 0.68
RFC4P35249 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFC4P35249 AL161670.2-201ENST00000557650 1227 ntBASIC19.33■□□□□ 0.68
RFC4P35249 RN7SL163P-201ENST00000583100 276 ntBASIC19.33■□□□□ 0.68
RFC4P35249 BNIP3P13-201ENST00000599968 566 ntBASIC19.33■□□□□ 0.68
RFC4P35249 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC19.33■□□□□ 0.68
RFC4P35249 AC004923.1-202ENST00000642106 209 ntBASIC19.33■□□□□ 0.68
RFC4P35249 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFC4P35249 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFC4P35249 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.33■□□□□ 0.68
RFC4P35249 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.33■□□□□ 0.68
RFC4P35249 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFC4P35249 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.33■□□□□ 0.68
RFC4P35249 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RFC4P35249 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFC4P35249 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFC4P35249 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
RFC4P35249 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFC4P35249 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.32■□□□□ 0.68
RFC4P35249 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.32■□□□□ 0.68
RFC4P35249 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFC4P35249 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RFC4P35249 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFC4P35249 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.32■□□□□ 0.68
RFC4P35249 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFC4P35249 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFC4P35249 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFC4P35249 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.32■□□□□ 0.68
RFC4P35249 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RFC4P35249 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFC4P35249 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFC4P35249 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
RFC4P35249 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFC4P35249 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFC4P35249 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFC4P35249 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFC4P35249 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC19.32■□□□□ 0.68
RFC4P35249 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFC4P35249 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFC4P35249 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC19.32■□□□□ 0.68
RFC4P35249 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC19.32■□□□□ 0.68
RFC4P35249 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC19.32■□□□□ 0.68
RFC4P35249 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC19.32■□□□□ 0.68
RFC4P35249 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RFC4P35249 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFC4P35249 AL805961.1-203ENST00000641078 1258 ntBASIC19.32■□□□□ 0.68
RFC4P35249 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFC4P35249 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.32■□□□□ 0.68
RFC4P35249 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.32■□□□□ 0.68
RFC4P35249 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.32■□□□□ 0.68
RFC4P35249 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.32■□□□□ 0.68
RFC4P35249 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFC4P35249 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.32■□□□□ 0.68
RFC4P35249 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFC4P35249 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFC4P35249 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RFC4P35249 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.32■□□□□ 0.68
RFC4P35249 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
RFC4P35249 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RFC4P35249 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.31■□□□□ 0.68
RFC4P35249 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFC4P35249 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFC4P35249 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFC4P35249 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms