Protein–RNA interactions for Protein: P19387

POLR2C, DNA-directed RNA polymerase II subunit RPB3, humanhuman

Predicted RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2CP19387 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2CP19387 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2CP19387 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
POLR2CP19387 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.13■□□□□ 0.01
POLR2CP19387 KRT17P7-201ENST00000451704 1104 ntBASIC15.13■□□□□ 0.01
POLR2CP19387 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
POLR2CP19387 INE1-201ENST00000456273 945 ntBASIC15.13■□□□□ 0.01
POLR2CP19387 KRT18P43-201ENST00000469825 1281 ntBASIC15.13■□□□□ 0.01
POLR2CP19387 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.13■□□□□ 0.01
POLR2CP19387 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.13■□□□□ 0.01
POLR2CP19387 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.13■□□□□ 0.01
POLR2CP19387 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2CP19387 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.13■□□□□ 0.01
POLR2CP19387 WFDC1-204ENST00000613603 549 ntBASIC15.13■□□□□ 0.01
POLR2CP19387 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.13■□□□□ 0.01
POLR2CP19387 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
POLR2CP19387 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
POLR2CP19387 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
POLR2CP19387 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.13■□□□□ 0.01
POLR2CP19387 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2CP19387 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2CP19387 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.13■□□□□ 0.01
POLR2CP19387 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2CP19387 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
POLR2CP19387 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2CP19387 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2CP19387 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2CP19387 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.12■□□□□ 0.01
POLR2CP19387 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2CP19387 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.12■□□□□ 0.01
POLR2CP19387 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
POLR2CP19387 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2CP19387 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2CP19387 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
POLR2CP19387 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
POLR2CP19387 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2CP19387 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.12■□□□□ 0.01
POLR2CP19387 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.12■□□□□ 0.01
POLR2CP19387 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2CP19387 AC011495.1-201ENST00000498085 584 ntBASIC15.12■□□□□ 0.01
POLR2CP19387 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.12■□□□□ 0.01
POLR2CP19387 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.12■□□□□ 0.01
POLR2CP19387 CR383656.12-201ENST00000549567 513 ntBASIC15.12■□□□□ 0.01
POLR2CP19387 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2CP19387 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.12■□□□□ 0.01
POLR2CP19387 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.12■□□□□ 0.01
POLR2CP19387 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2CP19387 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2CP19387 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 AC092127.1-201ENST00000567093 3455 ntBASIC15.12■□□□□ 0.01
POLR2CP19387 CICP13-201ENST00000422015 2789 ntBASIC15.12■□□□□ 0.01
POLR2CP19387 AC132872.4-202ENST00000622924 2756 ntBASIC15.12■□□□□ 0.01
POLR2CP19387 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.12■□□□□ 0.01
POLR2CP19387 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2CP19387 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
POLR2CP19387 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2CP19387 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2CP19387 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
POLR2CP19387 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.11■□□□□ 0.01
POLR2CP19387 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.11■□□□□ 0.01
POLR2CP19387 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
POLR2CP19387 AC007950.2-201ENST00000615045 2347 ntBASIC15.11■□□□□ 0.01
POLR2CP19387 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
POLR2CP19387 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2CP19387 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
POLR2CP19387 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
POLR2CP19387 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
POLR2CP19387 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2CP19387 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2CP19387 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.11■□□□□ 0.01
POLR2CP19387 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2CP19387 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
POLR2CP19387 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2CP19387 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.11■□□□□ 0.01
POLR2CP19387 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
POLR2CP19387 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
POLR2CP19387 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.11■□□□□ 0.01
POLR2CP19387 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
POLR2CP19387 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms