Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
ATF3P18847 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATF3P18847 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATF3P18847 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.05■□□□□ 0.96
ATF3P18847 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATF3P18847 AC020916.1-201ENST00000587762 1774 ntBASIC21.05■□□□□ 0.96
ATF3P18847 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATF3P18847 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ATF3P18847 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATF3P18847 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATF3P18847 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC21.04■□□□□ 0.96
ATF3P18847 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATF3P18847 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATF3P18847 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATF3P18847 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.04■□□□□ 0.96
ATF3P18847 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC21.04■□□□□ 0.96
ATF3P18847 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATF3P18847 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC21.04■□□□□ 0.96
ATF3P18847 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATF3P18847 FAM58BP-201ENST00000439056 645 ntBASIC21.04■□□□□ 0.96
ATF3P18847 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC21.04■□□□□ 0.96
ATF3P18847 SAMD11P1-201ENST00000571429 661 ntBASIC21.04■□□□□ 0.96
ATF3P18847 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC21.04■□□□□ 0.96
ATF3P18847 MIR4649-201ENST00000582839 64 ntBASIC21.04■□□□□ 0.96
ATF3P18847 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC21.04■□□□□ 0.96
ATF3P18847 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC21.04■□□□□ 0.96
ATF3P18847 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC21.04■□□□□ 0.96
ATF3P18847 AC007718.1-201ENST00000621078 280 ntBASIC21.04■□□□□ 0.96
ATF3P18847 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC21.04■□□□□ 0.96
ATF3P18847 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC21.04■□□□□ 0.96
ATF3P18847 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ATF3P18847 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ATF3P18847 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATF3P18847 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATF3P18847 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC21.04■□□□□ 0.96
ATF3P18847 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATF3P18847 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATF3P18847 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ATF3P18847 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC21.04■□□□□ 0.96
ATF3P18847 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ATF3P18847 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATF3P18847 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC21.04■□□□□ 0.96
ATF3P18847 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC21.04■□□□□ 0.96
ATF3P18847 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATF3P18847 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ATF3P18847 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATF3P18847 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATF3P18847 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATF3P18847 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATF3P18847 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATF3P18847 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATF3P18847 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC21.03■□□□□ 0.96
ATF3P18847 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATF3P18847 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC21.03■□□□□ 0.96
ATF3P18847 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ATF3P18847 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATF3P18847 AP000356.3-201ENST00000382243 753 ntBASIC21.03■□□□□ 0.96
ATF3P18847 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
ATF3P18847 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC21.03■□□□□ 0.96
ATF3P18847 BUD31-205ENST00000456893 512 ntTSL 5 BASIC21.03■□□□□ 0.96
ATF3P18847 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATF3P18847 HLA-J-204ENST00000495278 958 ntBASIC21.03■□□□□ 0.96
ATF3P18847 DUX4L46-201ENST00000566845 751 ntBASIC21.03■□□□□ 0.96
ATF3P18847 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC21.03■□□□□ 0.96
ATF3P18847 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATF3P18847 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATF3P18847 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATF3P18847 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC21.03■□□□□ 0.96
ATF3P18847 SHC1P1-201ENST00000425230 1745 ntBASIC21.03■□□□□ 0.96
ATF3P18847 AMT-204ENST00000427987 1646 ntTSL 5 BASIC21.03■□□□□ 0.96
ATF3P18847 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATF3P18847 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATF3P18847 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATF3P18847 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC21.03■□□□□ 0.96
ATF3P18847 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC21.02■□□□□ 0.96
ATF3P18847 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATF3P18847 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATF3P18847 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
ATF3P18847 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATF3P18847 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATF3P18847 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATF3P18847 PPOX-204ENST00000462866 473 ntTSL 5 BASIC21.02■□□□□ 0.96
ATF3P18847 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC21.02■□□□□ 0.96
ATF3P18847 AL157792.1-201ENST00000488281 530 ntBASIC21.02■□□□□ 0.96
ATF3P18847 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC21.02■□□□□ 0.96
ATF3P18847 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC21.02■□□□□ 0.96
ATF3P18847 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATF3P18847 PAM16-211ENST00000575848 518 ntTSL 3 BASIC21.02■□□□□ 0.96
ATF3P18847 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ATF3P18847 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC21.02■□□□□ 0.96
ATF3P18847 AC138894.2-201ENST00000602838 371 ntBASIC21.02■□□□□ 0.96
ATF3P18847 AC002472.3-201ENST00000640124 621 ntBASIC21.02■□□□□ 0.96
ATF3P18847 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATF3P18847 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATF3P18847 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATF3P18847 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATF3P18847 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ATF3P18847 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
ATF3P18847 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
ATF3P18847 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms