Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.23□□□□□ -0.45
CD28P10747 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.23□□□□□ -0.45
CD28P10747 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.23□□□□□ -0.45
CD28P10747 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.23□□□□□ -0.45
CD28P10747 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD28P10747 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CD28P10747 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
CD28P10747 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 PDIA3P1-201ENST00000471856 1510 ntBASIC12.22□□□□□ -0.45
CD28P10747 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CD28P10747 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CD28P10747 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 PGR-209ENST00000617858 2816 ntTSL 5 BASIC12.22□□□□□ -0.45
CD28P10747 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.22□□□□□ -0.45
CD28P10747 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CD28P10747 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.22□□□□□ -0.45
CD28P10747 KLF2P4-201ENST00000451959 1225 ntBASIC12.22□□□□□ -0.45
CD28P10747 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.22□□□□□ -0.45
CD28P10747 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.22□□□□□ -0.45
CD28P10747 ENPP7P5-201ENST00000541031 1031 ntBASIC12.22□□□□□ -0.45
CD28P10747 PTP4A1P2-201ENST00000546033 454 ntBASIC12.22□□□□□ -0.45
CD28P10747 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.22□□□□□ -0.45
CD28P10747 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.22□□□□□ -0.45
CD28P10747 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.22□□□□□ -0.45
CD28P10747 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.22□□□□□ -0.45
CD28P10747 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CD28P10747 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.22□□□□□ -0.45
CD28P10747 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 AL033527.4-201ENST00000641026 673 ntBASIC12.22□□□□□ -0.45
CD28P10747 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC12.22□□□□□ -0.45
CD28P10747 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.22□□□□□ -0.45
CD28P10747 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CD28P10747 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC12.22□□□□□ -0.45
CD28P10747 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.22□□□□□ -0.45
CD28P10747 AC092364.2-201ENST00000596710 2692 ntBASIC12.22□□□□□ -0.45
CD28P10747 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.22□□□□□ -0.45
CD28P10747 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD28P10747 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.22□□□□□ -0.45
CD28P10747 REXO1L6P-201ENST00000603433 1515 ntBASIC12.21□□□□□ -0.45
CD28P10747 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD28P10747 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD28P10747 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.21□□□□□ -0.45
CD28P10747 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD28P10747 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CD28P10747 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD28P10747 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
CD28P10747 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD28P10747 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC12.21□□□□□ -0.45
CD28P10747 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CD28P10747 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.21□□□□□ -0.45
CD28P10747 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CD28P10747 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CD28P10747 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.21□□□□□ -0.45
CD28P10747 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CD28P10747 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CD28P10747 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD28P10747 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC12.21□□□□□ -0.45
CD28P10747 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.21□□□□□ -0.45
CD28P10747 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CD28P10747 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CD28P10747 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CD28P10747 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD28P10747 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.21□□□□□ -0.45
CD28P10747 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD28P10747 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.21□□□□□ -0.45
CD28P10747 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.21□□□□□ -0.45
CD28P10747 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.21□□□□□ -0.45
CD28P10747 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CD28P10747 AC092658.1-201ENST00000505836 891 ntBASIC12.21□□□□□ -0.45
CD28P10747 AC068587.3-201ENST00000526613 355 ntBASIC12.21□□□□□ -0.45
CD28P10747 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.21□□□□□ -0.45
CD28P10747 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.21□□□□□ -0.45
CD28P10747 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms