Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 CROCCP4-201ENST00000457096 498 ntBASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 USP32P1-208ENST00000506594 1164 ntBASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 AC106886.1-201ENST00000568660 600 ntBASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 CLUHP6-201ENST00000580789 941 ntBASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 AC093813.1-201ENST00000605066 256 ntBASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 AC025181.2-201ENST00000606994 802 ntBASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 AC005252.2-201ENST00000624630 1141 ntBASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 AC092850.2-201ENST00000623821 2697 ntBASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.11■□□□□ 0.33
SRGAP2CP0DJJ0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 AP001582.1-201ENST00000525856 295 ntBASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 AL512343.1-201ENST00000605837 169 ntBASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 AC017083.2-201ENST00000608069 979 ntBASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 AC018665.1-201ENST00000622927 1362 ntBASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.1■□□□□ 0.33
SRGAP2CP0DJJ0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms