Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PDGFAP04085 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PDGFAP04085 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
PDGFAP04085 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PDGFAP04085 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.67□□□□□ -0.06
PDGFAP04085 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
PDGFAP04085 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PDGFAP04085 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.67□□□□□ -0.06
PDGFAP04085 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFAP04085 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFAP04085 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.66□□□□□ -0.06
PDGFAP04085 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PDGFAP04085 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.66□□□□□ -0.06
PDGFAP04085 KRT8P22-201ENST00000562317 1415 ntBASIC14.66□□□□□ -0.06
PDGFAP04085 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
PDGFAP04085 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFAP04085 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFAP04085 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.66□□□□□ -0.06
PDGFAP04085 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PDGFAP04085 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PDGFAP04085 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PDGFAP04085 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFAP04085 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFAP04085 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFAP04085 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFAP04085 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PDGFAP04085 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PDGFAP04085 AC006538.1-201ENST00000567905 1585 ntBASIC14.66□□□□□ -0.06
PDGFAP04085 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFAP04085 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.66□□□□□ -0.06
PDGFAP04085 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.66□□□□□ -0.06
PDGFAP04085 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.66□□□□□ -0.06
PDGFAP04085 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.66□□□□□ -0.06
PDGFAP04085 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.66□□□□□ -0.06
PDGFAP04085 KLF2P4-201ENST00000451959 1225 ntBASIC14.66□□□□□ -0.06
PDGFAP04085 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PDGFAP04085 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.66□□□□□ -0.06
PDGFAP04085 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.66□□□□□ -0.06
PDGFAP04085 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.66□□□□□ -0.06
PDGFAP04085 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFAP04085 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFAP04085 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFAP04085 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.66□□□□□ -0.06
PDGFAP04085 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFAP04085 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFAP04085 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.66□□□□□ -0.06
PDGFAP04085 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFAP04085 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFAP04085 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
PDGFAP04085 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.66□□□□□ -0.06
PDGFAP04085 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
PDGFAP04085 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFAP04085 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFAP04085 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PDGFAP04085 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PDGFAP04085 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PDGFAP04085 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFAP04085 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFAP04085 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFAP04085 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFAP04085 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFAP04085 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFAP04085 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFAP04085 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFAP04085 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFAP04085 KRT8P44-201ENST00000441609 1350 ntBASIC14.65□□□□□ -0.06
PDGFAP04085 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.65□□□□□ -0.06
PDGFAP04085 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFAP04085 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PDGFAP04085 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.65□□□□□ -0.06
PDGFAP04085 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.65□□□□□ -0.06
PDGFAP04085 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.65□□□□□ -0.06
PDGFAP04085 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.65□□□□□ -0.06
PDGFAP04085 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.65□□□□□ -0.06
PDGFAP04085 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.65□□□□□ -0.06
PDGFAP04085 TDH-203ENST00000531764 1110 ntBASIC14.65□□□□□ -0.06
PDGFAP04085 AL359711.2-201ENST00000563105 872 ntBASIC14.65□□□□□ -0.06
PDGFAP04085 AC036164.1-201ENST00000570544 333 ntBASIC14.65□□□□□ -0.06
PDGFAP04085 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.65□□□□□ -0.06
PDGFAP04085 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.65□□□□□ -0.06
PDGFAP04085 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFAP04085 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFAP04085 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.65□□□□□ -0.06
PDGFAP04085 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.65□□□□□ -0.06
PDGFAP04085 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFAP04085 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFAP04085 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.65□□□□□ -0.06
PDGFAP04085 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.65□□□□□ -0.06
PDGFAP04085 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFAP04085 KC6-207ENST00000600644 2311 ntTSL 3 BASIC14.65□□□□□ -0.06
PDGFAP04085 SNX18-202ENST00000343017 3140 ntBASIC14.65□□□□□ -0.06
PDGFAP04085 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.65□□□□□ -0.06
PDGFAP04085 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.65□□□□□ -0.06
PDGFAP04085 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFAP04085 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms