Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
UPK1BO75841 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.61□□□□□ -0.23
UPK1BO75841 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
UPK1BO75841 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UPK1BO75841 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK1BO75841 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK1BO75841 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.61□□□□□ -0.23
UPK1BO75841 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
UPK1BO75841 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
UPK1BO75841 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK1BO75841 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK1BO75841 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.61□□□□□ -0.23
UPK1BO75841 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
UPK1BO75841 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
UPK1BO75841 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK1BO75841 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.61□□□□□ -0.23
UPK1BO75841 AC098590.1-201ENST00000468126 897 ntBASIC13.61□□□□□ -0.23
UPK1BO75841 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.61□□□□□ -0.23
UPK1BO75841 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
UPK1BO75841 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.61□□□□□ -0.23
UPK1BO75841 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.61□□□□□ -0.23
UPK1BO75841 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.61□□□□□ -0.23
UPK1BO75841 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.61□□□□□ -0.23
UPK1BO75841 AC005412.3-201ENST00000580309 715 ntBASIC13.61□□□□□ -0.23
UPK1BO75841 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
UPK1BO75841 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
UPK1BO75841 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.61□□□□□ -0.23
UPK1BO75841 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
UPK1BO75841 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.61□□□□□ -0.23
UPK1BO75841 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
UPK1BO75841 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK1BO75841 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
UPK1BO75841 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK1BO75841 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK1BO75841 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK1BO75841 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK1BO75841 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK1BO75841 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
UPK1BO75841 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UPK1BO75841 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.61□□□□□ -0.23
UPK1BO75841 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK1BO75841 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK1BO75841 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UPK1BO75841 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK1BO75841 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
UPK1BO75841 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.6□□□□□ -0.23
UPK1BO75841 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
UPK1BO75841 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 CICP16-201ENST00000502609 2813 ntBASIC13.6□□□□□ -0.23
UPK1BO75841 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.6□□□□□ -0.23
UPK1BO75841 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
UPK1BO75841 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 AC016397.2-201ENST00000624848 1985 ntBASIC13.6□□□□□ -0.23
UPK1BO75841 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
UPK1BO75841 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.6□□□□□ -0.23
UPK1BO75841 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 AC246785.2-201ENST00000432512 513 ntBASIC13.6□□□□□ -0.23
UPK1BO75841 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.6□□□□□ -0.23
UPK1BO75841 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.6□□□□□ -0.23
UPK1BO75841 AL441883.1-201ENST00000566170 1045 ntBASIC13.6□□□□□ -0.23
UPK1BO75841 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.6□□□□□ -0.23
UPK1BO75841 MIR4321-201ENST00000592276 80 ntBASIC13.6□□□□□ -0.23
UPK1BO75841 AC010947.1-201ENST00000623454 693 ntBASIC13.6□□□□□ -0.23
UPK1BO75841 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
UPK1BO75841 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.6□□□□□ -0.23
UPK1BO75841 AF228730.7-201ENST00000641842 219 ntBASIC13.6□□□□□ -0.23
UPK1BO75841 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
UPK1BO75841 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.6□□□□□ -0.23
UPK1BO75841 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.6□□□□□ -0.23
UPK1BO75841 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
UPK1BO75841 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.6□□□□□ -0.23
UPK1BO75841 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 TP73-AS1-210ENST00000637775 1455 ntBASIC13.6□□□□□ -0.23
UPK1BO75841 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
UPK1BO75841 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.6□□□□□ -0.23
UPK1BO75841 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
UPK1BO75841 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK1BO75841 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
UPK1BO75841 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms