Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.21□□□□□ -0.29
PDCD6O75340 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PDCD6O75340 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.21□□□□□ -0.29
PDCD6O75340 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.21□□□□□ -0.29
PDCD6O75340 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PDCD6O75340 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.21□□□□□ -0.3
PDCD6O75340 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PDCD6O75340 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
PDCD6O75340 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.21□□□□□ -0.3
PDCD6O75340 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
PDCD6O75340 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.21□□□□□ -0.3
PDCD6O75340 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
PDCD6O75340 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PDCD6O75340 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
PDCD6O75340 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PDCD6O75340 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.21□□□□□ -0.3
PDCD6O75340 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.21□□□□□ -0.3
PDCD6O75340 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
PDCD6O75340 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.2□□□□□ -0.3
PDCD6O75340 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 AL390755.1-201ENST00000623716 2027 ntBASIC13.2□□□□□ -0.3
PDCD6O75340 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.2□□□□□ -0.3
PDCD6O75340 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
PDCD6O75340 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.2□□□□□ -0.3
PDCD6O75340 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.2□□□□□ -0.3
PDCD6O75340 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.2□□□□□ -0.3
PDCD6O75340 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
PDCD6O75340 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
PDCD6O75340 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
PDCD6O75340 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.2□□□□□ -0.3
PDCD6O75340 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.2□□□□□ -0.3
PDCD6O75340 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.2□□□□□ -0.3
PDCD6O75340 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
PDCD6O75340 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.2□□□□□ -0.3
PDCD6O75340 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.2□□□□□ -0.3
PDCD6O75340 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
PDCD6O75340 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.2□□□□□ -0.3
PDCD6O75340 AC022145.2-201ENST00000598203 171 ntBASIC13.2□□□□□ -0.3
PDCD6O75340 AC018529.1-201ENST00000613063 361 ntBASIC13.2□□□□□ -0.3
PDCD6O75340 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
PDCD6O75340 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
PDCD6O75340 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
PDCD6O75340 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.2□□□□□ -0.3
PDCD6O75340 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
PDCD6O75340 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
PDCD6O75340 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.2□□□□□ -0.3
PDCD6O75340 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.2□□□□□ -0.3
PDCD6O75340 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
PDCD6O75340 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.2□□□□□ -0.3
PDCD6O75340 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.2□□□□□ -0.3
PDCD6O75340 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
PDCD6O75340 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.19□□□□□ -0.3
PDCD6O75340 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PDCD6O75340 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.19□□□□□ -0.3
PDCD6O75340 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PDCD6O75340 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
PDCD6O75340 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PDCD6O75340 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.19□□□□□ -0.3
PDCD6O75340 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.19□□□□□ -0.3
PDCD6O75340 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
PDCD6O75340 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
PDCD6O75340 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.19□□□□□ -0.3
PDCD6O75340 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PDCD6O75340 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
PDCD6O75340 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.19□□□□□ -0.3
PDCD6O75340 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
PDCD6O75340 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
PDCD6O75340 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PDCD6O75340 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.19□□□□□ -0.3
PDCD6O75340 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
PDCD6O75340 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PDCD6O75340 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PDCD6O75340 SPDYE17-201ENST00000412399 783 ntBASIC13.19□□□□□ -0.3
PDCD6O75340 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.19□□□□□ -0.3
PDCD6O75340 KRT18P32-201ENST00000424695 1287 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms