Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.79□□□□□ -0.36
SSSCA1O60232 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSSCA1O60232 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
SSSCA1O60232 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
SSSCA1O60232 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.79□□□□□ -0.36
SSSCA1O60232 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SSSCA1O60232 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.79□□□□□ -0.36
SSSCA1O60232 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.79□□□□□ -0.36
SSSCA1O60232 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSSCA1O60232 BNIP3P1-202ENST00000550043 1585 ntBASIC12.79□□□□□ -0.36
SSSCA1O60232 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSSCA1O60232 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSSCA1O60232 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.79□□□□□ -0.36
SSSCA1O60232 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.79□□□□□ -0.36
SSSCA1O60232 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.79□□□□□ -0.36
SSSCA1O60232 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.79□□□□□ -0.36
SSSCA1O60232 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.79□□□□□ -0.36
SSSCA1O60232 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.79□□□□□ -0.36
SSSCA1O60232 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSSCA1O60232 PRYP6-201ENST00000514804 343 ntBASIC12.79□□□□□ -0.36
SSSCA1O60232 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.79□□□□□ -0.36
SSSCA1O60232 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.79□□□□□ -0.36
SSSCA1O60232 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.79□□□□□ -0.36
SSSCA1O60232 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.79□□□□□ -0.36
SSSCA1O60232 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSSCA1O60232 AC093458.2-201ENST00000623150 629 ntBASIC12.79□□□□□ -0.36
SSSCA1O60232 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.79□□□□□ -0.36
SSSCA1O60232 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.79□□□□□ -0.36
SSSCA1O60232 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSSCA1O60232 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.79□□□□□ -0.36
SSSCA1O60232 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSSCA1O60232 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSSCA1O60232 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSSCA1O60232 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SSSCA1O60232 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSSCA1O60232 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSSCA1O60232 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSSCA1O60232 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSSCA1O60232 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.79□□□□□ -0.36
SSSCA1O60232 AC006504.5-208ENST00000588784 2401 ntBASIC12.79□□□□□ -0.36
SSSCA1O60232 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSSCA1O60232 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSSCA1O60232 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSSCA1O60232 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SSSCA1O60232 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.78□□□□□ -0.36
SSSCA1O60232 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.78□□□□□ -0.36
SSSCA1O60232 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
SSSCA1O60232 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SSSCA1O60232 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SSSCA1O60232 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SSSCA1O60232 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
SSSCA1O60232 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SSSCA1O60232 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.78□□□□□ -0.36
SSSCA1O60232 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
SSSCA1O60232 FAM8A3P-201ENST00000427218 844 ntBASIC12.78□□□□□ -0.36
SSSCA1O60232 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.78□□□□□ -0.36
SSSCA1O60232 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.78□□□□□ -0.36
SSSCA1O60232 AC109635.5-201ENST00000533593 962 ntBASIC12.78□□□□□ -0.36
SSSCA1O60232 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 MIR4751-201ENST00000578027 74 ntBASIC12.78□□□□□ -0.36
SSSCA1O60232 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
SSSCA1O60232 AL009183.1-201ENST00000603760 355 ntBASIC12.78□□□□□ -0.36
SSSCA1O60232 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.78□□□□□ -0.36
SSSCA1O60232 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.78□□□□□ -0.36
SSSCA1O60232 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.78□□□□□ -0.36
SSSCA1O60232 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.78□□□□□ -0.36
SSSCA1O60232 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SSSCA1O60232 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SSSCA1O60232 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SSSCA1O60232 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSSCA1O60232 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SSSCA1O60232 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
SSSCA1O60232 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SSSCA1O60232 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SSSCA1O60232 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SSSCA1O60232 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.77□□□□□ -0.36
SSSCA1O60232 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
SSSCA1O60232 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SSSCA1O60232 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms