Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.33■□□□□ 0.04
CDC7O00311 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC7O00311 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC7O00311 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC7O00311 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CDC7O00311 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC7O00311 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CDC7O00311 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CDC7O00311 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.33■□□□□ 0.04
CDC7O00311 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.33■□□□□ 0.04
CDC7O00311 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC7O00311 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC7O00311 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 CICP24-201ENST00000605464 2705 ntBASIC15.32■□□□□ 0.04
CDC7O00311 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC7O00311 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC7O00311 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CDC7O00311 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC7O00311 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDC7O00311 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDC7O00311 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.32■□□□□ 0.04
CDC7O00311 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDC7O00311 AC107890.1-201ENST00000422478 521 ntBASIC15.32■□□□□ 0.04
CDC7O00311 AC092580.3-201ENST00000430932 139 ntBASIC15.32■□□□□ 0.04
CDC7O00311 RPL13P2-201ENST00000440687 659 ntBASIC15.32■□□□□ 0.04
CDC7O00311 RN7SL618P-201ENST00000477850 296 ntBASIC15.32■□□□□ 0.04
CDC7O00311 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.32■□□□□ 0.04
CDC7O00311 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC7O00311 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.32■□□□□ 0.04
CDC7O00311 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.32■□□□□ 0.04
CDC7O00311 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.32■□□□□ 0.04
CDC7O00311 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC7O00311 AL109936.8-201ENST00000641772 604 ntBASIC15.32■□□□□ 0.04
CDC7O00311 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
CDC7O00311 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.32■□□□□ 0.04
CDC7O00311 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDC7O00311 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.32■□□□□ 0.04
CDC7O00311 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC7O00311 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.32■□□□□ 0.04
CDC7O00311 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.32■□□□□ 0.04
CDC7O00311 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC7O00311 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC7O00311 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC7O00311 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC7O00311 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDC7O00311 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.31■□□□□ 0.04
CDC7O00311 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDC7O00311 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CDC7O00311 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.31■□□□□ 0.04
CDC7O00311 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.31■□□□□ 0.04
CDC7O00311 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 1889.4 ms