Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00473A8K010 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00473A8K010 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00473A8K010 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00473A8K010 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LINC00473A8K010 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC00473A8K010 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00473A8K010 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00473A8K010 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00473A8K010 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00473A8K010 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00473A8K010 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
LINC00473A8K010 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00473A8K010 LINC00552-201ENST00000625151 2579 ntBASIC12.72□□□□□ -0.37
LINC00473A8K010 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
LINC00473A8K010 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC00473A8K010 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
LINC00473A8K010 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
LINC00473A8K010 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00473A8K010 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00473A8K010 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00473A8K010 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LINC00473A8K010 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LINC00473A8K010 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00473A8K010 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC00473A8K010 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00473A8K010 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC00473A8K010 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00473A8K010 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
LINC00473A8K010 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00473A8K010 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00473A8K010 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00473A8K010 AC023141.5-201ENST00000458585 616 ntBASIC12.71□□□□□ -0.37
LINC00473A8K010 AC112482.1-201ENST00000492080 688 ntBASIC12.71□□□□□ -0.37
LINC00473A8K010 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC00473A8K010 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC00473A8K010 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC00473A8K010 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC00473A8K010 AL079307.3-201ENST00000556114 283 ntBASIC12.71□□□□□ -0.37
LINC00473A8K010 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.71□□□□□ -0.37
LINC00473A8K010 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00473A8K010 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00473A8K010 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 MIR6080-201ENST00000617359 66 ntBASIC12.71□□□□□ -0.37
LINC00473A8K010 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.71□□□□□ -0.37
LINC00473A8K010 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
LINC00473A8K010 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
LINC00473A8K010 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00473A8K010 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00473A8K010 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00473A8K010 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
LINC00473A8K010 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00473A8K010 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
LINC00473A8K010 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00473A8K010 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00473A8K010 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
LINC00473A8K010 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00473A8K010 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00473A8K010 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00473A8K010 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00473A8K010 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00473A8K010 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
LINC00473A8K010 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.71□□□□□ -0.38
LINC00473A8K010 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
LINC00473A8K010 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
LINC00473A8K010 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00473A8K010 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00473A8K010 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00473A8K010 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00473A8K010 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00473A8K010 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC00473A8K010 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00473A8K010 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00473A8K010 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00473A8K010 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LINC00473A8K010 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00473A8K010 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00473A8K010 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00473A8K010 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms