Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
LINC01558Q9Y6Z2 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
LINC01558Q9Y6Z2 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC8□□□□□ -1.13
LINC01558Q9Y6Z2 PER1-211ENST00000581082 4521 ntTSL 5 BASIC8□□□□□ -1.13
LINC01558Q9Y6Z2 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
LINC01558Q9Y6Z2 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC8□□□□□ -1.13
LINC01558Q9Y6Z2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC8□□□□□ -1.13
LINC01558Q9Y6Z2 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
LINC01558Q9Y6Z2 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
LINC01558Q9Y6Z2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
LINC01558Q9Y6Z2 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC8□□□□□ -1.13
LINC01558Q9Y6Z2 AP002008.2-201ENST00000635926 4870 ntBASIC8□□□□□ -1.13
LINC01558Q9Y6Z2 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
LINC01558Q9Y6Z2 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
LINC01558Q9Y6Z2 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 GBP1P1-201ENST00000394662 1740 ntBASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 KRT18P29-201ENST00000397031 1267 ntBASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 AC019129.2-201ENST00000609837 1235 ntBASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 HNRNPMP1-201ENST00000560685 1768 ntBASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 REXO1L1P-201ENST00000379010 6598 ntBASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC7.99□□□□□ -1.13
LINC01558Q9Y6Z2 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 TP73-203ENST00000357733 4899 ntTSL 5 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms