Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AL133338.1-201ENST00000565695 1517 ntBASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 AZGP1P1-201ENST00000411909 902 ntBASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 TOMM22P5-201ENST00000416399 439 ntBASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 AL355994.2-201ENST00000447882 704 ntBASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 PTP4A1P2-201ENST00000546033 454 ntBASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 AC010491.1-201ENST00000563101 2797 ntBASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDHGA9Q9Y5G4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 RN7SL219P-201ENST00000582872 296 ntBASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 AC093525.8-201ENST00000624099 1342 ntBASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHGA9Q9Y5G4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 SOCS2P1-201ENST00000417727 557 ntBASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 FAM21FP-201ENST00000426241 1131 ntBASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 AC134915.1-201ENST00000426461 574 ntBASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHGA9Q9Y5G4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms