Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 MYO15B-237ENST00000642007 4893 ntBASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 LINC00554-201ENST00000564841 3011 ntBASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 AC006486.2-201ENST00000624246 2199 ntBASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 AL139400.1-201ENST00000366220 510 ntBASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 AC025048.3-201ENST00000590609 569 ntBASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 TEX28P1-201ENST00000613479 1221 ntBASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 TEX28P2-201ENST00000617764 1221 ntBASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 AC005702.4-201ENST00000618393 416 ntBASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 SPDYE12P-201ENST00000618416 771 ntBASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 C18orf15-201ENST00000623680 2534 ntBASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 AC112693.3-201ENST00000624819 1983 ntBASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.6■□□□□ 0.09
VPS9D1Q9Y2B5 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS9D1Q9Y2B5 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms