Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPO2Q9UMS6 AC012508.2-201ENST00000567613 1472 ntBASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 OR6D1P-203ENST00000641209 4860 ntBASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 FAM86HP-204ENST00000513466 959 ntBASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 ECM1P1-201ENST00000604092 1279 ntBASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPO2Q9UMS6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 AC079328.2-201ENST00000561241 3354 ntBASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 PCDHA1-201ENST00000378133 2726 ntBASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 PFN1P12-201ENST00000455938 534 ntBASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPO2Q9UMS6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 MIR1202-201ENST00000408529 83 ntBASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 CNN2P10-201ENST00000443067 918 ntBASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 EEF1DP1-201ENST00000585891 896 ntBASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 AC009542.2-202ENST00000619004 1067 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms