Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TREM2Q9NZC2 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 AL691432.1-201ENST00000596308 1422 ntBASIC13.57□□□□□ -0.24
TREM2Q9NZC2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 AC006058.4-201ENST00000624016 1670 ntBASIC13.57□□□□□ -0.24
TREM2Q9NZC2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 AC004233.3-201ENST00000607794 1269 ntBASIC13.57□□□□□ -0.24
TREM2Q9NZC2 AC009118.2-201ENST00000613275 655 ntBASIC13.57□□□□□ -0.24
TREM2Q9NZC2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TREM2Q9NZC2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TREM2Q9NZC2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms